Atomistry » Zinc » PDB 2qla-2qym » 2qsw
Atomistry »
  Zinc »
    PDB 2qla-2qym »
      2qsw »

Zinc in PDB 2qsw: Crystal Structure of C-Terminal Domain of Abc Transporter / Atp- Binding Protein From Enterococcus Faecalis

Protein crystallography data

The structure of Crystal Structure of C-Terminal Domain of Abc Transporter / Atp- Binding Protein From Enterococcus Faecalis, PDB code: 2qsw was solved by J.Osipiuk, L.Bigelow, S.Clancy, A.Joachimiak, Midwest Center Forstructural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.80 / 1.50
Space group P 43 2 2
Cell size a, b, c (Å), α, β, γ (°) 38.896, 38.896, 111.938, 90.00, 90.00, 90.00
R / Rfree (%) 14.7 / 18.4

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of C-Terminal Domain of Abc Transporter / Atp- Binding Protein From Enterococcus Faecalis (pdb code 2qsw). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 3 binding sites of Zinc where determined in the Crystal Structure of C-Terminal Domain of Abc Transporter / Atp- Binding Protein From Enterococcus Faecalis, PDB code: 2qsw:
Jump to Zinc binding site number: 1; 2; 3;

Zinc binding site 1 out of 3 in 2qsw

Go back to Zinc Binding Sites List in 2qsw
Zinc binding site 1 out of 3 in the Crystal Structure of C-Terminal Domain of Abc Transporter / Atp- Binding Protein From Enterococcus Faecalis


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of C-Terminal Domain of Abc Transporter / Atp- Binding Protein From Enterococcus Faecalis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:14.6
occ:1.00
ND1 A:HIS276 1.9 13.3 1.0
OE2 A:GLU278 1.9 14.4 1.0
OE1 A:GLU338 2.0 16.6 1.0
O A:HOH66 2.1 13.5 1.0
CD A:GLU338 2.7 15.7 1.0
CD A:GLU278 2.7 12.8 1.0
OE1 A:GLU278 2.8 14.7 1.0
OE2 A:GLU338 2.8 15.2 1.0
CE1 A:HIS276 2.8 13.2 1.0
CG A:HIS276 3.1 15.0 1.0
CB A:HIS276 3.5 14.1 1.0
N A:HIS276 3.7 13.2 1.0
O A:ARG336 3.7 14.7 1.0
O A:LEU274 3.9 13.3 1.0
O A:HOH43 3.9 24.2 1.0
NE2 A:HIS276 4.0 15.1 1.0
CD2 A:HIS276 4.1 14.0 1.0
CG A:GLU278 4.2 13.2 1.0
CG A:GLU338 4.2 14.0 1.0
CA A:HIS276 4.2 13.7 1.0
C A:LEU274 4.4 13.4 1.0
C A:PHE275 4.5 12.9 1.0
N A:GLU338 4.5 12.8 1.0
CA A:PHE275 4.6 13.2 1.0
C A:ARG336 4.7 13.1 1.0
N A:PHE275 4.8 12.5 1.0
CB A:GLU338 4.8 13.4 1.0
CB A:LEU274 4.9 14.1 1.0

Zinc binding site 2 out of 3 in 2qsw

Go back to Zinc Binding Sites List in 2qsw
Zinc binding site 2 out of 3 in the Crystal Structure of C-Terminal Domain of Abc Transporter / Atp- Binding Protein From Enterococcus Faecalis


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of C-Terminal Domain of Abc Transporter / Atp- Binding Protein From Enterococcus Faecalis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn202

b:16.9
occ:1.00
OE1 A:GLU291 1.9 18.4 1.0
NE2 A:HIS287 2.0 13.5 1.0
CD A:GLU291 2.9 16.0 1.0
CE1 A:HIS287 3.0 15.8 1.0
CD2 A:HIS287 3.0 12.9 1.0
OE2 A:GLU291 3.2 19.0 1.0
O A:HOH98 3.7 53.4 1.0
ND1 A:HIS287 4.1 16.4 1.0
CG A:HIS287 4.1 13.0 1.0
CG A:GLU291 4.3 15.2 1.0
CB A:GLU291 4.6 13.1 1.0
OH A:TYR292 4.9 15.9 1.0
CD1 A:LEU335 4.9 17.3 1.0

Zinc binding site 3 out of 3 in 2qsw

Go back to Zinc Binding Sites List in 2qsw
Zinc binding site 3 out of 3 in the Crystal Structure of C-Terminal Domain of Abc Transporter / Atp- Binding Protein From Enterococcus Faecalis


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Crystal Structure of C-Terminal Domain of Abc Transporter / Atp- Binding Protein From Enterococcus Faecalis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn203

b:13.9
occ:0.30
OE2 A:GLU340 1.7 27.9 1.0
OE1 A:GLU345 2.1 33.8 1.0
CD A:GLU340 2.5 23.6 1.0
OE1 A:GLU340 2.7 26.9 1.0
CD A:GLU345 3.0 30.6 1.0
OE2 A:GLU345 3.2 35.4 1.0
NH2 A:ARG272 3.7 31.6 1.0
O A:HOH84 3.7 41.0 1.0
CG A:GLU340 4.0 19.3 1.0
NH1 A:ARG272 4.1 33.1 1.0
O A:HOH4 4.2 17.7 1.0
CZ A:ARG272 4.4 31.2 1.0
CG A:GLU345 4.4 28.8 1.0
CB A:GLU340 5.0 19.6 1.0

Reference:

J.Osipiuk, L.Bigelow, S.Clancy, A.Joachimiak. X-Ray Structure of C-Terminal Domain of Abc Transporter / Atp-Binding Protein From Enterococcus Faecalis. To Be Published.
Page generated: Thu Oct 17 03:35:11 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy