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Zinc in PDB 2qmy: Quinone Reductase 2 in Complex with Adrenochrome

Enzymatic activity of Quinone Reductase 2 in Complex with Adrenochrome

All present enzymatic activity of Quinone Reductase 2 in Complex with Adrenochrome:
1.10.99.2;

Protein crystallography data

The structure of Quinone Reductase 2 in Complex with Adrenochrome, PDB code: 2qmy was solved by Z.Zhang, Y.Fu, L.Buryanovskky, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 83.834, 106.461, 56.605, 90.00, 90.00, 90.00
R / Rfree (%) 19.5 / 25.9

Zinc Binding Sites:

The binding sites of Zinc atom in the Quinone Reductase 2 in Complex with Adrenochrome (pdb code 2qmy). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Quinone Reductase 2 in Complex with Adrenochrome, PDB code: 2qmy:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2qmy

Go back to Zinc Binding Sites List in 2qmy
Zinc binding site 1 out of 2 in the Quinone Reductase 2 in Complex with Adrenochrome


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Quinone Reductase 2 in Complex with Adrenochrome within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn231

b:29.7
occ:1.00
ND1 A:HIS173 2.3 24.0 1.0
ND1 A:HIS177 2.3 32.1 1.0
O A:CYS222 2.4 39.5 1.0
SG A:CYS222 2.5 40.2 1.0
CB A:CYS222 2.8 39.9 1.0
CG A:HIS177 3.0 30.9 1.0
C A:CYS222 3.1 39.7 1.0
CG A:HIS173 3.1 23.4 1.0
CE1 A:HIS177 3.3 32.1 1.0
CE1 A:HIS173 3.3 24.1 1.0
CB A:HIS177 3.3 27.3 1.0
CB A:HIS173 3.3 21.9 1.0
CA A:HIS173 3.5 21.9 1.0
CA A:CYS222 3.5 40.5 1.0
N A:THR223 4.0 38.6 1.0
CD2 A:HIS177 4.1 31.5 1.0
NE2 A:HIS177 4.2 33.0 1.0
CD2 A:HIS173 4.3 24.4 1.0
NE2 A:HIS173 4.3 26.1 1.0
N A:HIS173 4.4 21.9 1.0
C A:HIS173 4.4 23.0 1.0
O A:HIS173 4.5 23.8 1.0
CA A:THR223 4.5 37.6 1.0
N A:CYS222 4.8 41.9 1.0
CA A:HIS177 4.8 25.3 1.0
O A:GLN172 4.8 21.3 1.0
CE1 A:HIS227 4.9 45.8 1.0
C A:GLN172 5.0 20.7 1.0
CE1 A:TYR132 5.0 37.5 1.0

Zinc binding site 2 out of 2 in 2qmy

Go back to Zinc Binding Sites List in 2qmy
Zinc binding site 2 out of 2 in the Quinone Reductase 2 in Complex with Adrenochrome


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Quinone Reductase 2 in Complex with Adrenochrome within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn232

b:26.0
occ:1.00
ND1 B:HIS173 2.3 13.9 1.0
ND1 B:HIS177 2.3 19.6 1.0
O B:CYS222 2.4 27.1 1.0
SG B:CYS222 2.5 19.8 1.0
CB B:CYS222 3.0 22.9 1.0
C B:CYS222 3.1 26.0 1.0
CG B:HIS173 3.2 13.2 1.0
CE1 B:HIS177 3.3 18.0 1.0
CE1 B:HIS173 3.3 13.7 1.0
CG B:HIS177 3.4 18.1 1.0
CB B:HIS173 3.4 13.0 1.0
CA B:CYS222 3.6 24.8 1.0
CA B:HIS173 3.6 12.9 1.0
CB B:HIS177 3.6 13.3 1.0
N B:THR223 4.0 26.7 1.0
CD2 B:HIS173 4.3 15.2 1.0
NE2 B:HIS173 4.4 14.3 1.0
NE2 B:HIS177 4.4 19.7 1.0
CD2 B:HIS177 4.5 19.9 1.0
CA B:THR223 4.5 26.8 1.0
N B:HIS173 4.6 12.8 1.0
C B:HIS173 4.6 13.7 1.0
O B:HIS173 4.7 14.4 1.0
O B:GLN172 4.8 12.9 1.0
N B:CYS222 4.8 25.0 1.0
CE1 B:HIS227 5.0 23.9 1.0
CZ3 B:TRP169 5.0 17.6 1.0

Reference:

Z.Zhang, Y.Fu, L.Buryanovskky. Quinone Reductase 2 Regulates Catecholamine Oxidation To Be Published.
Page generated: Thu Oct 17 03:30:32 2024

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