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Zinc in PDB 2ql0: Zinc-Substituted Rubredoxin From Desulfovibrio Vulgaris

Zinc Binding Sites:

The binding sites of Zinc atom in the Zinc-Substituted Rubredoxin From Desulfovibrio Vulgaris (pdb code 2ql0). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Zinc-Substituted Rubredoxin From Desulfovibrio Vulgaris, PDB code: 2ql0:

Zinc binding site 1 out of 1 in 2ql0

Go back to Zinc Binding Sites List in 2ql0
Zinc binding site 1 out of 1 in the Zinc-Substituted Rubredoxin From Desulfovibrio Vulgaris


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Zinc-Substituted Rubredoxin From Desulfovibrio Vulgaris within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn53

b:33.1
occ:1.00
SG A:CYS6 2.3 13.2 1.0
SG A:CYS39 2.5 11.1 1.0
SG A:CYS9 2.5 14.2 1.0
SG A:CYS42 2.5 2.0 1.0
HB A:VAL41 2.9 65.2 1.0
HB3 A:CYS39 3.0 51.1 1.0
H2 A:CYS42 3.1 71.2 1.0
CB A:CYS39 3.2 15.3 1.0
HB A:VAL8 3.2 53.3 1.0
CB A:CYS6 3.3 41.1 1.0
HB2 A:CYS39 3.3 31.0 1.0
HB2 A:CYS6 3.3 14.2 1.0
H2 A:CYS9 3.3 34.5 1.0
HB3 A:CYS6 3.4 43.5 1.0
HG13 A:VAL41 3.7 14.4 1.0
CB A:CYS9 3.9 22.2 1.0
HB3 A:CYS9 3.9 30.1 1.0
H A:GLY43 3.9 22.1 1.0
CB A:VAL41 3.9 3.4 1.0
N A:CYS42 4.0 63.2 1.0
N A:CYS9 4.1 71.0 1.0
CB A:CYS42 4.1 21.0 1.0
HG12 A:VAL8 4.1 44.0 1.0
H2 A:VAL41 4.2 2.3 1.0
HB3 A:ALA44 4.2 5.4 1.0
H2 A:VAL8 4.2 32.1 1.0
CG1 A:VAL41 4.3 71.4 1.0
CB A:VAL8 4.3 54.1 1.0
HB3 A:TYR11 4.4 53.3 1.0
H A:GLY10 4.4 4.3 1.0
HZ A:PHE49 4.5 34.3 1.0
H2 A:ALA44 4.5 21.1 1.0
HG12 A:VAL41 4.5 52.2 1.0
HB3 A:CYS42 4.6 62.3 1.0
CA A:CYS9 4.6 43.1 1.0
CA A:CYS42 4.7 10.0 1.0
CA A:CYS39 4.7 24.2 1.0
HB2 A:CYS9 4.7 51.1 1.0
HG22 A:VAL41 4.7 51.3 1.0
H2 A:TYR11 4.7 42.1 1.0
CA A:CYS6 4.7 51.0 1.0
CG2 A:VAL41 4.8 33.3 1.0
CA A:VAL41 4.8 64.2 1.0
HG23 A:VAL41 4.8 20.3 1.0
CG1 A:VAL8 4.8 10.0 1.0
N A:GLY43 4.8 43.1 1.0
C A:VAL41 4.9 61.4 1.0
HB2 A:CYS42 4.9 1.2 1.0
N A:VAL41 4.9 43.3 1.0
HD2 A:TYR11 4.9 13.3 1.0
CZ A:PHE49 4.9 14.4 1.0
C A:VAL8 4.9 13.3 1.0
CA A:VAL8 5.0 41.1 1.0
HA A:CYS6 5.0 73.3 1.0
N A:VAL8 5.0 53.2 1.0

Reference:

B.J.Goodfellow, S.G.Nunes, B.F.Volkman, J.J.G.Moura, A.L.Macedo, I.C.Duarte, J.L.Markley, I.Moura. To Be Published.
Page generated: Wed Dec 16 03:50:33 2020

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