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Zinc in PDB 2ou3: Crystal Structure of A Tellurite Resistance Protein of COG3793 (NPUN_F6341) From Nostoc Punctiforme Pcc 73102 at 1.85 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Tellurite Resistance Protein of COG3793 (NPUN_F6341) From Nostoc Punctiforme Pcc 73102 at 1.85 A Resolution, PDB code: 2ou3 was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.31 / 1.85
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 38.490, 56.190, 152.300, 90.00, 90.00, 90.00
R / Rfree (%) 16.1 / 21.3

Other elements in 2ou3:

The structure of Crystal Structure of A Tellurite Resistance Protein of COG3793 (NPUN_F6341) From Nostoc Punctiforme Pcc 73102 at 1.85 A Resolution also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of A Tellurite Resistance Protein of COG3793 (NPUN_F6341) From Nostoc Punctiforme Pcc 73102 at 1.85 A Resolution (pdb code 2ou3). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 6 binding sites of Zinc where determined in the Crystal Structure of A Tellurite Resistance Protein of COG3793 (NPUN_F6341) From Nostoc Punctiforme Pcc 73102 at 1.85 A Resolution, PDB code: 2ou3:
Jump to Zinc binding site number: 1; 2; 3; 4; 5; 6;

Zinc binding site 1 out of 6 in 2ou3

Go back to Zinc Binding Sites List in 2ou3
Zinc binding site 1 out of 6 in the Crystal Structure of A Tellurite Resistance Protein of COG3793 (NPUN_F6341) From Nostoc Punctiforme Pcc 73102 at 1.85 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of A Tellurite Resistance Protein of COG3793 (NPUN_F6341) From Nostoc Punctiforme Pcc 73102 at 1.85 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn161

b:26.5
occ:1.00
 OD1 A:ASP107 2.0 18.4 1.0
OE2 A:GLU114 2.0 26.3 1.0
O A:SER104 2.1 21.1 1.0
O A:HOH193 2.2 23.1 1.0
OE2 A:GLU49 2.2 24.6 1.0
O A:HOH191 2.3 22.7 1.0
CD A:GLU114 3.0 24.5 1.0
CG A:ASP107 3.0 23.4 1.0
C A:SER104 3.1 19.6 1.0
CD A:GLU49 3.3 20.9 1.0
OE1 A:GLU114 3.3 28.2 1.0
O A:HOH350 3.3 55.3 1.0
OD2 A:ASP107 3.4 26.0 1.0
CA A:SER104 3.7 19.7 1.0
O A:HOH351 3.7 49.0 1.0
CG A:GLU49 3.9 22.7 1.0
O A:HOH220 4.0 28.4 1.0
OE1 A:GLU49 4.2 24.2 1.0
CB A:SER104 4.3 21.2 1.0
N A:ALA105 4.3 17.6 1.0
O A:GLY108 4.3 33.5 1.0
CG A:GLU114 4.3 26.5 1.0
CB A:ASP107 4.4 25.4 1.0
N A:ASP107 4.5 25.2 1.0
CA A:ALA105 4.7 19.8 1.0
C A:ASP107 4.7 29.0 1.0
CA A:ASP107 4.8 27.6 1.0
O A:VAL103 4.8 16.7 1.0
C A:ALA105 4.9 20.8 1.0
N A:GLY108 4.9 30.6 1.0
N A:ALA106 4.9 20.8 1.0
N A:SER104 5.0 15.9 1.0

Zinc binding site 2 out of 6 in 2ou3

Go back to Zinc Binding Sites List in 2ou3
Zinc binding site 2 out of 6 in the Crystal Structure of A Tellurite Resistance Protein of COG3793 (NPUN_F6341) From Nostoc Punctiforme Pcc 73102 at 1.85 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of A Tellurite Resistance Protein of COG3793 (NPUN_F6341) From Nostoc Punctiforme Pcc 73102 at 1.85 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn162

b:31.1
occ:0.50
 ZN A:ZN162 0.0 31.1 0.5
ZN A:ZN162 1.8 36.0 0.5
OE1 A:GLU48 2.1 34.3 1.0
OE2 A:GLU48 2.6 32.4 1.0
CD A:GLU48 2.7 25.6 1.0
CG A:GLU48 4.2 27.6 1.0
CA A:ASP107 4.2 27.6 1.0
O A:ALA106 4.5 25.8 1.0
O A:ASP107 4.5 28.8 1.0
C A:ASP107 4.5 29.0 1.0
CB A:ASP107 4.7 25.4 1.0
CB A:GLU48 4.8 22.7 1.0

Zinc binding site 3 out of 6 in 2ou3

Go back to Zinc Binding Sites List in 2ou3
Zinc binding site 3 out of 6 in the Crystal Structure of A Tellurite Resistance Protein of COG3793 (NPUN_F6341) From Nostoc Punctiforme Pcc 73102 at 1.85 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Crystal Structure of A Tellurite Resistance Protein of COG3793 (NPUN_F6341) From Nostoc Punctiforme Pcc 73102 at 1.85 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn162

b:36.0
occ:0.50
 ZN A:ZN162 0.0 36.0 0.5
ZN A:ZN162 1.8 31.1 0.5
OE2 A:GLU48 2.1 32.4 1.0
CD A:GLU48 2.9 25.6 1.0
OE1 A:GLU48 3.1 34.3 1.0
O A:ALA106 3.9 25.8 1.0
CG A:GLU48 4.4 27.6 1.0
CA A:ASP107 4.7 27.6 1.0

Zinc binding site 4 out of 6 in 2ou3

Go back to Zinc Binding Sites List in 2ou3
Zinc binding site 4 out of 6 in the Crystal Structure of A Tellurite Resistance Protein of COG3793 (NPUN_F6341) From Nostoc Punctiforme Pcc 73102 at 1.85 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 4 of Crystal Structure of A Tellurite Resistance Protein of COG3793 (NPUN_F6341) From Nostoc Punctiforme Pcc 73102 at 1.85 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn161

b:25.3
occ:1.00
 OE2 B:GLU114 2.0 24.6 1.0
OD1 B:ASP107 2.0 24.1 1.0
O B:SER104 2.0 20.7 1.0
OE2 B:GLU49 2.0 25.9 1.0
O B:HOH191 2.2 20.9 1.0
O B:HOH218 2.4 26.2 1.0
CD B:GLU114 3.0 27.2 1.0
CG B:ASP107 3.0 26.4 1.0
C B:SER104 3.1 19.7 1.0
CD B:GLU49 3.2 23.3 1.0
OE1 B:GLU114 3.3 28.2 1.0
OD2 B:ASP107 3.3 26.4 1.0
CA B:SER104 3.6 19.2 1.0
CG B:GLU49 3.8 22.5 1.0
O B:HOH254 4.0 34.2 1.0
O B:HOH346 4.0 48.8 1.0
OE1 B:GLU49 4.1 24.5 1.0
CB B:SER104 4.2 19.0 1.0
N B:ALA105 4.2 18.3 1.0
CG B:GLU114 4.3 26.2 1.0
O B:GLY108 4.3 33.6 1.0
CB B:ASP107 4.4 27.9 1.0
N B:ASP107 4.5 25.2 1.0
CA B:ALA105 4.7 19.9 1.0
C B:ASP107 4.7 29.0 1.0
O B:VAL103 4.8 16.1 1.0
CA B:ASP107 4.8 27.3 1.0
C B:ALA105 4.9 20.4 1.0
N B:GLY108 4.9 30.6 1.0
N B:SER104 4.9 15.0 1.0
N B:ALA106 4.9 20.3 1.0

Zinc binding site 5 out of 6 in 2ou3

Go back to Zinc Binding Sites List in 2ou3
Zinc binding site 5 out of 6 in the Crystal Structure of A Tellurite Resistance Protein of COG3793 (NPUN_F6341) From Nostoc Punctiforme Pcc 73102 at 1.85 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 5 of Crystal Structure of A Tellurite Resistance Protein of COG3793 (NPUN_F6341) From Nostoc Punctiforme Pcc 73102 at 1.85 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn162

b:16.8
occ:1.00
 OD2 B:ASP133 2.0 13.6 1.0
OE2 B:GLU129 2.0 19.8 1.0
OD1 B:ASP133 2.6 13.1 1.0
CG B:ASP133 2.6 11.4 1.0
CD B:GLU129 3.0 18.7 1.0
CG B:GLU129 3.3 16.6 1.0
O B:HOH243 4.0 30.8 1.0
CB B:ASP133 4.1 12.4 1.0
OE1 B:GLU129 4.2 19.4 1.0
NH2 B:ARG119 4.2 22.3 1.0
NE B:ARG119 4.2 19.9 1.0
O B:GLU129 4.6 16.7 1.0
O B:HOH315 4.7 43.1 1.0
CZ B:ARG119 4.7 24.3 1.0
CB B:GLU129 4.8 16.7 1.0
O B:HOH256 5.0 33.4 1.0

Zinc binding site 6 out of 6 in 2ou3

Go back to Zinc Binding Sites List in 2ou3
Zinc binding site 6 out of 6 in the Crystal Structure of A Tellurite Resistance Protein of COG3793 (NPUN_F6341) From Nostoc Punctiforme Pcc 73102 at 1.85 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 6 of Crystal Structure of A Tellurite Resistance Protein of COG3793 (NPUN_F6341) From Nostoc Punctiforme Pcc 73102 at 1.85 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn163

b:21.8
occ:1.00
 OE1 B:GLU68 2.1 21.0 1.0
O B:HOH167 2.1 10.0 1.0
CD B:GLU68 2.8 23.8 1.0
OE2 B:GLU68 2.9 30.5 1.0
CG B:GLU68 4.3 17.5 1.0
CA B:TRP65 4.4 13.1 1.0
N B:TRP65 4.5 13.6 1.0
O B:HOH184 4.6 20.4 1.0
CB B:TRP65 4.6 15.9 1.0
CB B:ASP64 4.7 16.6 1.0
CB B:GLU68 4.8 13.0 1.0
C B:ASP64 4.9 14.9 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Thu Oct 17 02:46:24 2024

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