Zinc in PDB 2oik: Crystal Structure of A Histidine Triad (Hit) Protein (MFLA_2506) From Methylobacillus Flagellatus Kt at 1.65 A Resolution

The structure of Crystal Structure of A Histidine Triad (Hit) Protein (MFLA_2506) From Methylobacillus Flagellatus Kt at 1.65 A Resolution, PDB code: 2oik was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.55 / 1.65
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	45.243, 47.981, 69.766, 108.13, 98.22, 90.34
R / Rfree (%)	17.9 / 22.3

The structure of Crystal Structure of A Histidine Triad (Hit) Protein (MFLA_2506) From Methylobacillus Flagellatus Kt at 1.65 A Resolution also contains other interesting chemical elements:

Chlorine

(Cl)

5 atoms

The binding sites of Zinc atom in the Crystal Structure of A Histidine Triad (Hit) Protein (MFLA_2506) From Methylobacillus Flagellatus Kt at 1.65 A Resolution (pdb code 2oik). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 4 binding sites of Zinc where determined in the Crystal Structure of A Histidine Triad (Hit) Protein (MFLA_2506) From Methylobacillus Flagellatus Kt at 1.65 A Resolution, PDB code: 2oik:
Jump to Zinc binding site number: 1; 2; 3; 4;

Zinc binding site 1 out of 4 in the Crystal Structure of A Histidine Triad (Hit) Protein (MFLA_2506) From Methylobacillus Flagellatus Kt at 1.65 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of A Histidine Triad (Hit) Protein (MFLA_2506) From Methylobacillus Flagellatus Kt at 1.65 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:11.4 occ:1.00 ND1 A:HIS49 2.0 13.2 1.0 ND1 A:HIS95 2.1 11.0 1.0 SG A:CYS11 2.1 11.8 1.0 SG A:CYS14 2.3 11.9 1.0 CE1 A:HIS49 2.9 17.4 1.0 CB A:CYS11 3.1 16.2 1.0 CE1 A:HIS95 3.1 13.4 1.0 CG A:HIS95 3.1 11.8 1.0 CG A:HIS49 3.1 15.1 1.0 CB A:HIS95 3.4 9.5 1.0 CB A:CYS14 3.5 11.9 1.0 CB A:HIS49 3.6 13.9 1.0 N A:CYS14 3.6 10.2 1.0 CA A:CYS14 4.0 12.2 1.0 NE2 A:HIS49 4.1 15.8 1.0 CA A:HIS49 4.1 13.2 1.0 C A:LEU13 4.2 9.8 1.0 CD2 A:HIS49 4.2 18.2 1.0 NE2 A:HIS95 4.2 10.1 1.0 CD2 A:HIS95 4.2 9.1 1.0 CA A:CYS11 4.5 14.6 1.0 CB A:LEU13 4.6 9.4 1.0 O A:CYS11 4.6 12.8 1.0 O A:LEU13 4.7 13.7 1.0 CA A:HIS95 4.7 9.5 1.0 CA A:LEU13 4.7 10.4 1.0 C A:CYS11 4.7 15.0 1.0 N A:LEU13 4.8 9.9 1.0 CB A:HIS8 4.8 30.8 1.0 O A:HOH315 4.9 28.7 1.0 N A:HIS8 4.9 33.4 1.0 N A:HIS49 4.9 15.6 1.0

Zinc binding site 2 out of 4 in the Crystal Structure of A Histidine Triad (Hit) Protein (MFLA_2506) From Methylobacillus Flagellatus Kt at 1.65 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of A Histidine Triad (Hit) Protein (MFLA_2506) From Methylobacillus Flagellatus Kt at 1.65 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn201 b:13.0 occ:1.00 ND1 B:HIS49 2.1 11.1 1.0 ND1 B:HIS95 2.1 11.2 1.0 SG B:CYS11 2.3 10.9 1.0 SG B:CYS14 2.3 11.0 1.0 CE1 B:HIS95 3.0 4.6 1.0 CE1 B:HIS49 3.0 17.4 1.0 CG B:HIS49 3.1 10.8 1.0 CB B:CYS11 3.2 16.1 1.0 CG B:HIS95 3.2 9.3 1.0 CB B:HIS49 3.5 13.0 1.0 CB B:CYS14 3.5 14.0 1.0 CB B:HIS95 3.5 6.9 1.0 N B:CYS14 3.6 7.7 1.0 CA B:CYS14 4.0 13.8 1.0 CA B:HIS49 4.1 13.0 1.0 C B:LEU13 4.1 11.0 1.0 NE2 B:HIS95 4.2 2.0 1.0 NE2 B:HIS49 4.2 11.6 1.0 CD2 B:HIS49 4.2 18.8 1.0 CD2 B:HIS95 4.3 2.7 1.0 CA B:CYS11 4.6 14.1 1.0 CB B:HIS8 4.6 29.3 1.0 O B:HOH277 4.7 33.6 1.0 CB B:LEU13 4.7 12.5 1.0 O B:LEU13 4.7 13.0 1.0 CA B:LEU13 4.7 10.7 1.0 CA B:HIS95 4.7 9.4 1.0 O B:HOH282 4.8 35.9 1.0 N B:HIS49 4.8 11.7 1.0 N B:LEU13 4.8 10.0 1.0 C B:CYS11 4.8 12.7 1.0 O B:CYS11 4.8 11.6 1.0 N B:HIS8 4.9 32.5 1.0 O B:HIS8 4.9 27.4 1.0

Zinc binding site 3 out of 4 in the Crystal Structure of A Histidine Triad (Hit) Protein (MFLA_2506) From Methylobacillus Flagellatus Kt at 1.65 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Crystal Structure of A Histidine Triad (Hit) Protein (MFLA_2506) From Methylobacillus Flagellatus Kt at 1.65 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ C:Zn201 b:12.1 occ:1.00 ND1 C:HIS49 2.1 12.9 1.0 ND1 C:HIS95 2.1 10.5 1.0 SG C:CYS11 2.3 10.2 1.0 SG C:CYS14 2.3 9.7 1.0 CE1 C:HIS49 3.0 18.6 1.0 CE1 C:HIS95 3.0 6.6 1.0 CB C:CYS11 3.1 14.7 1.0 CG C:HIS95 3.1 9.1 1.0 CG C:HIS49 3.1 12.3 1.0 CB C:CYS14 3.5 12.0 1.0 CB C:HIS95 3.5 10.3 1.0 CB C:HIS49 3.5 14.4 1.0 N C:CYS14 3.5 10.8 1.0 CA C:CYS14 3.9 12.2 1.0 CA C:HIS49 4.0 12.9 1.0 C C:LEU13 4.1 10.5 1.0 NE2 C:HIS49 4.1 16.9 1.0 NE2 C:HIS95 4.1 6.3 1.0 CD2 C:HIS49 4.2 13.3 1.0 CD2 C:HIS95 4.2 3.5 1.0 CA C:CYS11 4.5 14.8 1.0 CB C:LEU13 4.6 11.4 1.0 O C:HOH285 4.6 34.8 1.0 CB C:HIS8 4.6 30.1 1.0 O C:LEU13 4.7 13.2 1.0 CA C:LEU13 4.7 12.1 1.0 O C:CYS11 4.7 13.1 1.0 CA C:HIS95 4.7 10.2 1.0 N C:LEU13 4.7 12.3 1.0 N C:HIS49 4.8 13.1 1.0 C C:CYS11 4.8 12.3 1.0 N C:HIS8 4.9 32.8 1.0

Zinc binding site 4 out of 4 in the Crystal Structure of A Histidine Triad (Hit) Protein (MFLA_2506) From Methylobacillus Flagellatus Kt at 1.65 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 4 of Crystal Structure of A Histidine Triad (Hit) Protein (MFLA_2506) From Methylobacillus Flagellatus Kt at 1.65 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ D:Zn201 b:12.4 occ:1.00 ND1 D:HIS49 1.9 11.3 1.0 ND1 D:HIS95 2.1 10.9 1.0 SG D:CYS11 2.3 12.9 1.0 SG D:CYS14 2.3 11.7 1.0 CE1 D:HIS49 2.8 18.1 1.0 CE1 D:HIS95 3.0 13.5 1.0 CG D:HIS49 3.1 16.6 1.0 CB D:CYS11 3.1 13.9 1.0 CG D:HIS95 3.2 11.2 1.0 CB D:CYS14 3.4 12.5 1.0 CB D:HIS95 3.5 10.1 1.0 N D:CYS14 3.5 12.8 1.0 CB D:HIS49 3.6 13.0 1.0 CA D:CYS14 3.9 11.5 1.0 NE2 D:HIS49 3.9 14.1 1.0 C D:LEU13 4.1 12.2 1.0 CA D:HIS49 4.1 14.9 1.0 CD2 D:HIS49 4.1 14.2 1.0 NE2 D:HIS95 4.1 8.0 1.0 CD2 D:HIS95 4.2 7.7 1.0 CA D:CYS11 4.5 14.4 1.0 CB D:LEU13 4.6 10.6 1.0 CA D:LEU13 4.7 13.0 1.0 O D:LEU13 4.7 11.5 1.0 CB D:HIS8 4.7 32.2 1.0 O D:CYS11 4.7 14.5 1.0 N D:LEU13 4.7 11.4 1.0 C D:CYS11 4.8 12.9 1.0 CA D:HIS95 4.8 10.2 1.0 N D:HIS49 4.8 14.3 1.0 N D:HIS8 4.9 34.5 1.0 O D:HIS8 5.0 26.4 1.0

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.