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Zinc in PDB 2o1l: Structure of A Complex of C-Terminal Lobe of Bovine Lactoferrin with Disaccharide at 1.97 A Resolution

Protein crystallography data

The structure of Structure of A Complex of C-Terminal Lobe of Bovine Lactoferrin with Disaccharide at 1.97 A Resolution, PDB code: 2o1l was solved by N.Singh, S.Sharma, M.Perbandt, P.Kaur, C.Betzel, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 62.02 / 1.97
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 61.609, 50.017, 65.395, 90.00, 107.11, 90.00
R / Rfree (%) 21.4 / 23.1

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of A Complex of C-Terminal Lobe of Bovine Lactoferrin with Disaccharide at 1.97 A Resolution (pdb code 2o1l). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of A Complex of C-Terminal Lobe of Bovine Lactoferrin with Disaccharide at 1.97 A Resolution, PDB code: 2o1l:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2o1l

Go back to Zinc Binding Sites List in 2o1l
Zinc binding site 1 out of 2 in the Structure of A Complex of C-Terminal Lobe of Bovine Lactoferrin with Disaccharide at 1.97 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of A Complex of C-Terminal Lobe of Bovine Lactoferrin with Disaccharide at 1.97 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn689

b:35.3
occ:1.00
O A:HOH2258 2.0 39.3 1.0
OE2 A:GLU659 2.2 34.1 1.0
OE1 A:GLU659 2.3 31.5 1.0
CD A:GLU659 2.5 32.1 1.0
O A:GLY653 3.9 41.9 1.0
CG A:GLU659 4.0 32.0 1.0
O A:HOH2240 4.4 56.1 1.0
O A:ARG654 4.5 36.3 1.0
CA A:PRO655 4.6 34.5 1.0
N A:THR656 4.8 32.0 1.0
CB A:GLU659 4.8 32.1 1.0
CG2 A:THR656 4.9 29.3 1.0

Zinc binding site 2 out of 2 in 2o1l

Go back to Zinc Binding Sites List in 2o1l
Zinc binding site 2 out of 2 in the Structure of A Complex of C-Terminal Lobe of Bovine Lactoferrin with Disaccharide at 1.97 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of A Complex of C-Terminal Lobe of Bovine Lactoferrin with Disaccharide at 1.97 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn690

b:47.9
occ:1.00
O A:HOH2210 1.9 95.3 1.0
O A:HOH2225 2.0 36.4 1.0
NE2 A:HIS588 2.1 38.9 1.0
CE1 A:HIS588 3.0 38.4 1.0
CD2 A:HIS588 3.2 38.3 1.0
ND1 A:HIS588 4.2 39.2 1.0
CG A:HIS588 4.3 38.0 1.0
CG2 A:VAL591 4.3 34.9 1.0
O A:HOH2073 4.7 42.2 1.0
O A:HOH2183 4.7 49.2 1.0
O A:HOH2129 4.9 76.1 1.0

Reference:

N.Singh, S.Sharma, M.Perbandt, P.Kaur, C.Betzel, T.P.Singh. Structure of A Complex of C-Terminal Lobe of Bovine Lactoferrin with Disaccharide at 1.97 A Resolution To Be Published.
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