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Zinc in PDB 2n6j: Solution Structure of ZMP1, A Zinc-Dependent Metalloprotease Secreted By Clostridium Difficile

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of ZMP1, A Zinc-Dependent Metalloprotease Secreted By Clostridium Difficile (pdb code 2n6j). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Solution Structure of ZMP1, A Zinc-Dependent Metalloprotease Secreted By Clostridium Difficile, PDB code: 2n6j:

Zinc binding site 1 out of 1 in 2n6j

Go back to Zinc Binding Sites List in 2n6j
Zinc binding site 1 out of 1 in the Solution Structure of ZMP1, A Zinc-Dependent Metalloprotease Secreted By Clostridium Difficile


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of ZMP1, A Zinc-Dependent Metalloprotease Secreted By Clostridium Difficile within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:0.7
occ:1.00
OE2 A:GLU185 1.9 0.9 1.0
O A:HOH302 1.9 2.5 1.0
OE1 A:GLU185 2.0 1.0 1.0
NE2 A:HIS146 2.0 0.7 1.0
NE2 A:HIS142 2.1 0.7 1.0
CD A:GLU185 2.2 0.5 1.0
H1 A:HOH302 2.6 2.7 1.0
H2 A:HOH302 2.7 3.0 1.0
CE1 A:HIS146 3.0 1.2 1.0
CD2 A:HIS142 3.0 0.8 1.0
HE2 A:TYR178 3.1 3.6 1.0
CD2 A:HIS146 3.1 0.8 1.0
HD2 A:HIS142 3.2 0.9 1.0
HE1 A:HIS146 3.2 1.9 1.0
CE1 A:HIS142 3.3 0.6 1.0
HD2 A:HIS146 3.4 1.3 1.0
CE2 A:TYR178 3.4 2.2 1.0
HE1 A:HIS142 3.6 0.7 1.0
CG A:GLU185 3.6 0.9 1.0
HA A:GLU185 3.6 0.6 1.0
CZ A:TYR178 3.9 1.1 1.0
HG2 A:GLU185 4.0 1.5 1.0
OH A:TYR178 4.0 1.4 1.0
CD2 A:TYR178 4.1 2.0 1.0
HG3 A:GLU184 4.1 1.2 1.0
ND1 A:HIS146 4.2 1.2 1.0
OE2 A:GLU143 4.2 1.8 1.0
CG A:HIS146 4.2 0.6 1.0
CG A:HIS142 4.3 0.6 1.0
HG3 A:GLU185 4.3 1.5 1.0
HD2 A:TYR178 4.3 3.3 1.0
ND1 A:HIS142 4.4 0.6 1.0
CB A:GLU185 4.4 0.6 1.0
HB3 A:GLU185 4.4 0.9 1.0
CA A:GLU185 4.5 0.6 1.0
HH A:TYR178 4.7 1.8 1.0
CD A:GLU143 4.8 1.2 1.0
HB1 A:ALA188 4.9 0.6 1.0
CE1 A:TYR178 4.9 2.1 1.0

Reference:

J.T.Rubino, M.Martinelli, F.Cantini, A.Castagnetti, R.Leuzzi, L.Banci, M.Scarselli. Structural Characterization of Zinc-Bound ZMP1, A Zinc-Dependent Metalloprotease Secreted By Clostridium Difficile. J.Biol.Inorg.Chem. V. 21 185 2016.
ISSN: ISSN 0949-8257
PubMed: 26711661
DOI: 10.1007/S00775-015-1319-6
Page generated: Wed Dec 16 03:41:58 2020

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