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Zinc in PDB 2mrf: uc(Nmr) Structure of the Ubiquitin-Binding Zinc Finger (Ubz) Domain From Human RAD18

Zinc Binding Sites:

The binding sites of Zinc atom in the uc(Nmr) Structure of the Ubiquitin-Binding Zinc Finger (Ubz) Domain From Human RAD18 (pdb code 2mrf). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the uc(Nmr) Structure of the Ubiquitin-Binding Zinc Finger (Ubz) Domain From Human RAD18, PDB code: 2mrf:

Zinc binding site 1 out of 1 in 2mrf

Go back to Zinc Binding Sites List in 2mrf
Zinc binding site 1 out of 1 in the uc(Nmr) Structure of the Ubiquitin-Binding Zinc Finger (Ubz) Domain From Human RAD18


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of uc(Nmr) Structure of the Ubiquitin-Binding Zinc Finger (Ubz) Domain From Human RAD18 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:0.0
occ:1.00
ND1 A:HIS219 2.1 0.0 1.0
SG A:CYS223 2.3 0.0 1.0
SG A:CYS204 2.3 0.0 1.0
SG A:CYS207 2.4 0.0 1.0
CE1 A:HIS219 3.0 0.0 1.0
HG21 A:VAL209 3.1 0.0 1.0
CG A:HIS219 3.2 0.0 1.0
HE1 A:HIS219 3.2 0.0 1.0
HB3 A:HIS219 3.2 0.0 1.0
HB3 A:CYS204 3.4 0.0 1.0
HB3 A:CYS207 3.4 0.0 1.0
CB A:CYS204 3.4 0.0 1.0
CB A:CYS223 3.6 0.0 1.0
HB2 A:CYS223 3.6 0.0 1.0
CB A:CYS207 3.6 0.0 1.0
HB2 A:CYS204 3.6 0.0 1.0
HG22 A:VAL209 3.6 0.0 1.0
CB A:HIS219 3.7 0.0 1.0
HB3 A:CYS223 3.8 0.0 1.0
H A:CYS207 3.8 0.0 1.0
O A:HIS219 3.8 0.0 1.0
HA A:LEU220 3.8 0.0 1.0
CG2 A:VAL209 3.8 0.0 1.0
C A:HIS219 3.9 0.0 1.0
NE2 A:HIS219 4.2 0.0 1.0
HG23 A:VAL209 4.2 0.0 1.0
CD2 A:HIS219 4.3 0.0 1.0
N A:LEU220 4.3 0.0 1.0
CA A:HIS219 4.3 0.0 1.0
HB2 A:CYS207 4.3 0.0 1.0
HB A:VAL206 4.4 0.0 1.0
N A:CYS207 4.4 0.0 1.0
HD11 A:ILE211 4.5 0.0 1.0
CA A:CYS207 4.6 0.0 1.0
HA A:HIS219 4.6 0.0 1.0
CA A:LEU220 4.6 0.0 1.0
H A:GLY208 4.6 0.0 1.0
HB2 A:HIS219 4.6 0.0 1.0
H A:VAL209 4.7 0.0 1.0
O A:GLU227 4.8 0.0 1.0
H A:LEU220 4.9 0.0 1.0
HG12 A:VAL209 4.9 0.0 1.0
HB3 A:LEU220 4.9 0.0 1.0
CA A:CYS204 4.9 0.0 1.0
HD12 A:ILE216 4.9 0.0 1.0
CA A:CYS223 4.9 0.0 1.0
OXT A:GLU227 5.0 0.0 1.0

Reference:

A.A.Rizzo, P.E.Salerno, I.Bezsonova, D.M.Korzhnev. uc(Nmr) Structure of the Human RAD18 Zinc Finger in Complex with Ubiquitin Defines A Class of Ubz Domains in Proteins Linked to the Dna Damage Response. Biochemistry V. 53 5895 2014.
ISSN: ISSN 0006-2960
PubMed: 25162118
DOI: 10.1021/BI500823H
Page generated: Wed Dec 16 03:40:55 2020

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