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Zinc in PDB 2m1s: uc(Nmr) Assignment of the Arenaviral Protein Z From Lassa Fever Virus

Zinc Binding Sites:

The binding sites of Zinc atom in the uc(Nmr) Assignment of the Arenaviral Protein Z From Lassa Fever Virus (pdb code 2m1s). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the uc(Nmr) Assignment of the Arenaviral Protein Z From Lassa Fever Virus, PDB code: 2m1s:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2m1s

Go back to Zinc Binding Sites List in 2m1s
Zinc binding site 1 out of 2 in the uc(Nmr) Assignment of the Arenaviral Protein Z From Lassa Fever Virus


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of uc(Nmr) Assignment of the Arenaviral Protein Z From Lassa Fever Virus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn100

b:0.0
occ:1.00
SG A:CYS50 2.3 0.0 1.0
SG A:CYS34 2.3 0.0 1.0
SG A:CYS53 2.3 0.0 1.0
SG A:CYS31 2.3 0.0 1.0
H A:CYS50 2.6 0.0 1.0
H A:CYS34 3.2 0.0 1.0
HB3 A:CYS53 3.2 0.0 1.0
HB3 A:CYS34 3.4 0.0 1.0
CB A:CYS53 3.4 0.0 1.0
H A:CYS53 3.4 0.0 1.0
HD11 A:LEU49 3.4 0.0 1.0
N A:CYS50 3.5 0.0 1.0
CB A:CYS50 3.5 0.0 1.0
CB A:CYS31 3.5 0.0 1.0
CB A:CYS34 3.5 0.0 1.0
HB3 A:CYS50 3.5 0.0 1.0
HB3 A:CYS31 3.5 0.0 1.0
HB2 A:CYS31 3.8 0.0 1.0
HB2 A:SER33 3.9 0.0 1.0
CA A:CYS50 4.0 0.0 1.0
HG A:LEU49 4.0 0.0 1.0
H A:TRP35 4.0 0.0 1.0
N A:CYS34 4.0 0.0 1.0
O A:CYS50 4.1 0.0 1.0
HD12 A:LEU49 4.1 0.0 1.0
HB2 A:CYS53 4.1 0.0 1.0
HB2 A:ASN52 4.1 0.0 1.0
N A:CYS53 4.1 0.0 1.0
CD1 A:LEU49 4.2 0.0 1.0
HA A:LEU49 4.2 0.0 1.0
HB2 A:CYS34 4.3 0.0 1.0
C A:CYS50 4.4 0.0 1.0
CA A:CYS34 4.4 0.0 1.0
HB2 A:CYS50 4.4 0.0 1.0
CA A:CYS53 4.4 0.0 1.0
C A:LEU49 4.6 0.0 1.0
CG A:LEU49 4.6 0.0 1.0
HE1 A:TRP35 4.6 0.0 1.0
H A:LEU54 4.7 0.0 1.0
NE1 A:TRP35 4.7 0.0 1.0
N A:TRP35 4.8 0.0 1.0
H A:SER33 4.8 0.0 1.0
CA A:CYS31 4.8 0.0 1.0
CA A:LEU49 4.8 0.0 1.0
CB A:SER33 4.9 0.0 1.0
O A:TRP35 4.9 0.0 1.0
HD21 A:ASN52 4.9 0.0 1.0
HA A:CYS50 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 2m1s

Go back to Zinc Binding Sites List in 2m1s
Zinc binding site 2 out of 2 in the uc(Nmr) Assignment of the Arenaviral Protein Z From Lassa Fever Virus


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of uc(Nmr) Assignment of the Arenaviral Protein Z From Lassa Fever Virus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn101

b:0.0
occ:1.00
ND1 A:HIS47 2.0 0.0 1.0
SG A:CYS44 2.3 0.0 1.0
SG A:CYS67 2.3 0.0 1.0
SG A:CYS64 2.3 0.0 1.0
HB3 A:HIS47 2.8 0.0 1.0
CE1 A:HIS47 3.0 0.0 1.0
CG A:HIS47 3.1 0.0 1.0
HE1 A:HIS47 3.2 0.0 1.0
HB3 A:CYS44 3.2 0.0 1.0
CB A:CYS44 3.3 0.0 1.0
H A:CYS67 3.3 0.0 1.0
CB A:HIS47 3.4 0.0 1.0
HB A:ILE66 3.5 0.0 1.0
HB2 A:CYS44 3.5 0.0 1.0
HB3 A:CYS64 3.6 0.0 1.0
CB A:CYS64 3.6 0.0 1.0
CB A:CYS67 3.7 0.0 1.0
HB2 A:CYS67 3.7 0.0 1.0
N A:CYS67 3.9 0.0 1.0
HB2 A:HIS47 3.9 0.0 1.0
HB2 A:CYS64 4.1 0.0 1.0
NE2 A:HIS47 4.2 0.0 1.0
CD2 A:HIS47 4.2 0.0 1.0
CA A:CYS67 4.3 0.0 1.0
HB3 A:CYS67 4.5 0.0 1.0
HA A:CYS67 4.5 0.0 1.0
CB A:ILE66 4.6 0.0 1.0
CA A:CYS44 4.7 0.0 1.0
HG22 A:ILE66 4.7 0.0 1.0
H A:ILE66 4.7 0.0 1.0
CA A:HIS47 4.8 0.0 1.0
H A:ASN45 4.8 0.0 1.0
CA A:CYS64 4.8 0.0 1.0
C A:ILE66 4.9 0.0 1.0
HA A:CYS44 4.9 0.0 1.0
HA A:CYS64 5.0 0.0 1.0
H A:HIS47 5.0 0.0 1.0

Reference:

L.Volpon, M.J.Osborne, A.A.Capul, J.C.De La Torre, K.L.B.Borden. Structural Characterization of the Z Ring-EIF4E Complex Reveals A Distinct Mode of Control For EIF4E Proc.Natl.Acad.Sci.Usa V. 107 5441 2010.
ISSN: ISSN 0027-8424
PubMed: 20212144
DOI: 10.1073/PNAS.0909877107
Page generated: Wed Dec 16 03:39:14 2020

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