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Zinc in PDB 2loa: Structural Basis For Bifunctional Zn(II) Macrocyclic Complex Recognition of Thymine Bulges in Dna

Zinc Binding Sites:

The binding sites of Zinc atom in the Structural Basis For Bifunctional Zn(II) Macrocyclic Complex Recognition of Thymine Bulges in Dna (pdb code 2loa). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structural Basis For Bifunctional Zn(II) Macrocyclic Complex Recognition of Thymine Bulges in Dna, PDB code: 2loa:

Zinc binding site 1 out of 1 in 2loa

Go back to Zinc Binding Sites List in 2loa
Zinc binding site 1 out of 1 in the Structural Basis For Bifunctional Zn(II) Macrocyclic Complex Recognition of Thymine Bulges in Dna


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structural Basis For Bifunctional Zn(II) Macrocyclic Complex Recognition of Thymine Bulges in Dna within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn102

b:0.0
occ:1.00
N3 A:DT9 1.5 0.0 1.0
O2 A:DT9 1.9 0.0 1.0
C2 A:DT9 1.9 0.0 1.0
N4' A:C4Q101 2.6 0.0 1.0
N3' A:C4Q101 2.7 0.0 1.0
H8'A A:C4Q101 2.7 0.0 1.0
C4 A:DT9 2.8 0.0 1.0
N1' A:C4Q101 2.8 0.0 1.0
HN3' A:C4Q101 2.9 0.0 1.0
HN4' A:C4Q101 3.0 0.0 1.0
C8' A:C4Q101 3.1 0.0 1.0
O4 A:DT9 3.1 0.0 1.0
N1 A:DT9 3.3 0.0 1.0
C7' A:C4Q101 3.4 0.0 1.0
H3 A:C4Q101 3.5 0.0 1.0
C5' A:C4Q101 3.5 0.0 1.0
C6' A:C4Q101 3.6 0.0 1.0
C3 A:C4Q101 3.6 0.0 1.0
H5'A A:C4Q101 3.6 0.0 1.0
CM A:C4Q101 3.7 0.0 1.0
C4 A:C4Q101 3.7 0.0 1.0
C4' A:C4Q101 3.8 0.0 1.0
H4'A A:C4Q101 3.9 0.0 1.0
C5 A:DT9 3.9 0.0 1.0
C1' A:C4Q101 4.0 0.0 1.0
C6 A:DT9 4.0 0.0 1.0
H7'A A:C4Q101 4.0 0.0 1.0
H1' A:C4Q101 4.1 0.0 1.0
H6' A:C4Q101 4.1 0.0 1.0
H8' A:C4Q101 4.1 0.0 1.0
H1' A:DT9 4.2 0.0 1.0
HMA A:C4Q101 4.3 0.0 1.0
C1' A:DT9 4.3 0.0 1.0
H7' A:C4Q101 4.3 0.0 1.0
N2' A:C4Q101 4.3 0.0 1.0
C3' A:C4Q101 4.4 0.0 1.0
H2' A:DT9 4.4 0.0 1.0
H3' A:C4Q101 4.5 0.0 1.0
C2 A:C4Q101 4.5 0.0 1.0
H6'A A:C4Q101 4.5 0.0 1.0
HM A:C4Q101 4.5 0.0 1.0
H5' A:C4Q101 4.5 0.0 1.0
C10 A:C4Q101 4.6 0.0 1.0
H4' A:C4Q101 4.7 0.0 1.0
C2' A:C4Q101 4.7 0.0 1.0
H1'A A:C4Q101 4.8 0.0 1.0
C2' A:DT9 4.9 0.0 1.0
H2 A:C4Q101 4.9 0.0 1.0

Reference:

I.M.Del Mundo, K.E.Siters, M.A.Fountain, J.R.Morrow. Structural Basis For Bifunctional Zinc(II) Macrocyclic Complex Recognition of Thymine Bulges in Dna. Inorg.Chem. V. 51 5444 2012.
ISSN: ISSN 0020-1669
PubMed: 22507054
DOI: 10.1021/IC3004245
Page generated: Wed Dec 16 03:37:57 2020

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