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Zinc in PDB 2lk0: Solution Structure and Binding Studies of the RANBP2-Type Zinc Finger of RBM5

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure and Binding Studies of the RANBP2-Type Zinc Finger of RBM5 (pdb code 2lk0). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Solution Structure and Binding Studies of the RANBP2-Type Zinc Finger of RBM5, PDB code: 2lk0:

Zinc binding site 1 out of 1 in 2lk0

Go back to Zinc Binding Sites List in 2lk0
Zinc binding site 1 out of 1 in the Solution Structure and Binding Studies of the RANBP2-Type Zinc Finger of RBM5


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure and Binding Studies of the RANBP2-Type Zinc Finger of RBM5 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn32

b:2.0
occ:1.00
SG A:CYS24 2.4 -1.1 1.0
SG A:CYS10 2.4 -1.1 1.0
SG A:CYS7 2.4 -1.1 1.0
SG A:CYS21 2.4 -1.1 1.0
HB3 A:CYS21 2.8 0.0 1.0
HB2 A:CYS7 2.9 0.0 1.0
CB A:CYS21 2.9 0.1 1.0
HB3 A:CYS7 2.9 0.0 1.0
H A:CYS10 2.9 0.4 1.0
CB A:CYS7 2.9 0.1 1.0
H A:CYS24 2.9 0.4 1.0
HB2 A:CYS21 3.0 0.0 1.0
HB3 A:ARG23 3.5 0.0 1.0
HB3 A:CYS24 3.7 0.0 1.0
CB A:CYS24 3.7 0.1 1.0
CB A:CYS10 3.7 0.1 1.0
HB3 A:LYS9 3.7 0.0 1.0
HB3 A:CYS10 3.8 0.0 1.0
N A:CYS10 3.8 -0.7 1.0
N A:CYS24 3.9 -0.7 1.0
HB3 A:LEU12 3.9 0.0 1.0
H A:LEU12 4.1 0.4 1.0
H A:LYS9 4.2 0.4 1.0
HB2 A:LYS9 4.3 0.0 1.0
H A:ARG23 4.3 0.4 1.0
CA A:CYS21 4.4 0.4 1.0
CA A:CYS10 4.4 0.4 1.0
H A:ALA26 4.4 0.4 1.0
CA A:CYS24 4.4 0.4 1.0
HD2 A:ARG23 4.4 0.0 1.0
CA A:CYS7 4.4 0.4 1.0
H A:GLY25 4.4 0.4 1.0
CB A:LYS9 4.5 0.0 1.0
HB2 A:CYS10 4.5 0.0 1.0
HB2 A:CYS24 4.6 0.0 1.0
CB A:ARG23 4.6 0.0 1.0
H A:CYS11 4.6 0.4 1.0
HD23 A:LEU12 4.7 0.0 1.0
HB3 A:ALA26 4.7 0.0 1.0
HB2 A:LEU12 4.7 0.0 1.0
HA A:CYS21 4.7 0.0 1.0
HZ3 A:TRP5 4.8 0.1 1.0
CB A:LEU12 4.8 0.0 1.0
HA A:CYS7 4.8 0.0 1.0
O A:ALA26 4.9 -0.6 1.0
C A:LYS9 4.9 0.6 1.0
C A:CYS21 4.9 0.6 1.0
N A:LYS9 4.9 -0.7 1.0
C A:ARG23 4.9 0.6 1.0
C A:CYS10 5.0 0.6 1.0

Reference:

B.Farina, R.Fattorusso, M.Pellecchia. Targeting Zinc Finger Domains with Small Molecules: Solution Structure and Binding Studies of the RANBP2-Type Zinc Finger of RBM5. Chembiochem V. 12 2837 2011.
ISSN: ISSN 1439-4227
PubMed: 22162216
DOI: 10.1002/CBIC.201100582
Page generated: Wed Dec 16 03:37:48 2020

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