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Zinc in PDB 2ljz: Structure of the C-Terminal Domain of HPV16 E6 Oncoprotein

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of the C-Terminal Domain of HPV16 E6 Oncoprotein (pdb code 2ljz). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of the C-Terminal Domain of HPV16 E6 Oncoprotein, PDB code: 2ljz:

Zinc binding site 1 out of 1 in 2ljz

Go back to Zinc Binding Sites List in 2ljz
Zinc binding site 1 out of 1 in the Structure of the C-Terminal Domain of HPV16 E6 Oncoprotein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of the C-Terminal Domain of HPV16 E6 Oncoprotein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:0.0
occ:1.00
SG A:CYS139 2.2 0.0 1.0
SG A:CYS106 2.3 0.0 1.0
SG A:CYS136 2.3 0.0 1.0
SG A:CYS103 2.3 0.0 1.0
HB2 A:CYS139 2.9 0.0 1.0
HD21 A:ASN105 2.9 0.0 1.0
HB2 A:CYS106 3.1 0.0 1.0
H A:CYS136 3.2 0.0 1.0
CB A:CYS139 3.2 0.0 1.0
CB A:CYS106 3.3 0.0 1.0
HB3 A:CYS136 3.4 0.0 1.0
CB A:CYS136 3.4 0.0 1.0
CB A:CYS103 3.5 0.0 1.0
HB2 A:CYS103 3.6 0.0 1.0
H A:CYS106 3.6 0.0 1.0
ND2 A:ASN105 3.6 0.0 1.0
HD22 A:ASN105 3.7 0.0 1.0
H A:CYS139 3.7 0.0 1.0
HB3 A:CYS103 3.7 0.0 1.0
HB3 A:CYS139 3.8 0.0 1.0
HB2 A:SER138 3.8 0.0 1.0
N A:CYS136 3.8 0.0 1.0
N A:CYS106 4.0 0.0 1.0
HB3 A:CYS106 4.1 0.0 1.0
HB2 A:ASN105 4.1 0.0 1.0
CA A:CYS136 4.1 0.0 1.0
HZ3 A:LYS108 4.1 0.0 1.0
CA A:CYS106 4.2 0.0 1.0
N A:CYS139 4.2 0.0 1.0
HB2 A:CYS136 4.3 0.0 1.0
CA A:CYS139 4.3 0.0 1.0
HE2 A:LYS108 4.4 0.0 1.0
HA A:ARG135 4.4 0.0 1.0
HA A:CYS106 4.4 0.0 1.0
O A:CYS136 4.5 0.0 1.0
HD22 A:LEU110 4.5 0.0 1.0
C A:CYS136 4.6 0.0 1.0
H A:ASN105 4.6 0.0 1.0
HB3 A:LYS108 4.6 0.0 1.0
CG A:ASN105 4.7 0.0 1.0
HA A:CYS139 4.8 0.0 1.0
CA A:CYS103 4.8 0.0 1.0
H A:SER138 4.8 0.0 1.0
HD3 A:LYS108 4.8 0.0 1.0
CB A:SER138 4.8 0.0 1.0
HA A:CYS103 4.9 0.0 1.0
C A:ASN105 4.9 0.0 1.0
CB A:ASN105 4.9 0.0 1.0
C A:ARG135 5.0 0.0 1.0
NZ A:LYS108 5.0 0.0 1.0
H A:ILE104 5.0 0.0 1.0

Reference:

K.Zanier, A.Ould M'hamed Ould Sidi, C.Boulade-Ladame, V.Rybin, A.Chappelle, A.Atkinson, B.Kieffer, G.Trave. Solution Structure Analysis of the HPV16 E6 Oncoprotein Reveals A Self-Association Mechanism Required For E6-Mediated Degradation of P53. Structure V. 20 604 2012.
ISSN: ISSN 0969-2126
PubMed: 22483108
DOI: 10.1016/J.STR.2012.02.001
Page generated: Wed Dec 16 03:37:45 2020

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