Zinc in PDB 2l45: C-Terminal Zinc Knuckle of the HIVNCP7 with Dna

The binding sites of Zinc atom in the C-Terminal Zinc Knuckle of the HIVNCP7 with Dna (pdb code 2l45). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the C-Terminal Zinc Knuckle of the HIVNCP7 with Dna, PDB code: 2l45:

Zinc binding site 1 out of 1 in the C-Terminal Zinc Knuckle of the HIVNCP7 with Dna


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of C-Terminal Zinc Knuckle of the HIVNCP7 with Dna within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn26 b:0.0 occ:1.00 SG A:CYS16 2.0 0.0 1.0 SG A:CYS3 2.0 0.0 1.0 SG A:CYS6 2.0 0.0 1.0 HB2 A:CYS6 2.8 0.0 1.0 CB A:CYS6 3.0 0.0 1.0 HG3 A:LYS5 3.1 0.0 1.0 H A:CYS6 3.1 0.0 1.0 HB2 A:CYS16 3.2 0.0 1.0 CB A:CYS16 3.3 0.0 1.0 CB A:CYS3 3.5 0.0 1.0 HB2 A:CYS3 3.6 0.0 1.0 NE2 A:HIS11 3.7 0.0 1.0 N A:CYS6 3.8 0.0 1.0 HB3 A:CYS6 3.8 0.0 1.0 H A:LYS5 3.8 0.0 1.0 HB3 A:CYS16 3.9 0.0 1.0 H A:TRP4 4.0 0.0 1.0 CA A:CYS6 4.0 0.0 1.0 HB3 A:CYS3 4.0 0.0 1.0 HD2 A:LYS5 4.0 0.0 1.0 HD2 A:HIS11 4.0 0.0 1.0 HB2 A:GLU18 4.1 0.0 1.0 CG A:LYS5 4.1 0.0 1.0 HA A:CYS16 4.2 0.0 1.0 CD2 A:HIS11 4.2 0.0 1.0 HG3 A:GLU18 4.3 0.0 1.0 CA A:CYS16 4.4 0.0 1.0 HZ1 A:LYS8 4.4 0.0 1.0 HZ2 A:LYS8 4.4 0.0 1.0 CD A:LYS5 4.5 0.0 1.0 HD3 A:LYS5 4.5 0.0 1.0 HA A:CYS6 4.5 0.0 1.0 HG2 A:LYS5 4.5 0.0 1.0 H A:GLY7 4.6 0.0 1.0 HA A:CYS3 4.6 0.0 1.0 N A:LYS5 4.6 0.0 1.0 CA A:CYS3 4.7 0.0 1.0 C A:LYS5 4.7 0.0 1.0 H A:GLU18 4.8 0.0 1.0 CE1 A:HIS11 4.9 0.0 1.0 HG2 A:GLU18 4.9 0.0 1.0 N A:TRP4 4.9 0.0 1.0 NZ A:LYS8 4.9 0.0 1.0 CG A:GLU18 5.0 0.0 1.0 CB A:GLU18 5.0 0.0 1.0

S.Quintal, A.Viegas, S.Erhardt, E.J.Cabrita, N.P.Farrell. Platinated Dna Affects Zinc Finger Conformation. Interaction of A Platinated Single-Stranded Oligonucleotide and the C-Terminal Zinc Finger of Nucleocapsid Protein HIVNCP7. Biochemistry V. 51 1752 2012.
ISSN: ISSN 0006-2960
PubMed: 22303928
DOI: 10.1021/BI201834G