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Zinc in PDB 2l30: Human Parp-1 Zinc Finger 1

Enzymatic activity of Human Parp-1 Zinc Finger 1

All present enzymatic activity of Human Parp-1 Zinc Finger 1:
2.4.2.30;

Zinc Binding Sites:

The binding sites of Zinc atom in the Human Parp-1 Zinc Finger 1 (pdb code 2l30). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Human Parp-1 Zinc Finger 1, PDB code: 2l30:

Zinc binding site 1 out of 1 in 2l30

Go back to Zinc Binding Sites List in 2l30
Zinc binding site 1 out of 1 in the Human Parp-1 Zinc Finger 1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Human Parp-1 Zinc Finger 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn109

b:0.0
occ:1.00
ND1 A:HIS53 2.0 0.0 1.0
SG A:CYS21 2.3 0.0 1.0
SG A:CYS24 2.3 0.0 1.0
SG A:CYS56 2.4 0.0 1.0
CE1 A:HIS53 3.0 0.0 1.0
H A:HIS53 3.1 0.0 1.0
CG A:HIS53 3.1 0.0 1.0
HE1 A:HIS53 3.2 0.0 1.0
HB2 A:HIS53 3.2 0.0 1.0
H A:CYS24 3.3 0.0 1.0
CB A:CYS21 3.4 0.0 1.0
HB2 A:CYS21 3.5 0.0 1.0
HB3 A:CYS24 3.5 0.0 1.0
CB A:CYS56 3.5 0.0 1.0
CB A:CYS24 3.5 0.0 1.0
HB2 A:CYS56 3.6 0.0 1.0
CB A:HIS53 3.7 0.0 1.0
HB3 A:CYS21 3.7 0.0 1.0
HB3 A:CYS56 3.7 0.0 1.0
N A:HIS53 4.0 0.0 1.0
HB2 A:TYR52 4.0 0.0 1.0
HZ3 A:LYS59 4.0 0.0 1.0
N A:CYS24 4.1 0.0 1.0
NE2 A:HIS53 4.1 0.0 1.0
CD2 A:HIS53 4.2 0.0 1.0
HB3 A:LYS23 4.2 0.0 1.0
CA A:CYS24 4.3 0.0 1.0
HB2 A:CYS24 4.4 0.0 1.0
CA A:HIS53 4.5 0.0 1.0
HB3 A:HIS53 4.5 0.0 1.0
HB2 A:GLU26 4.6 0.0 1.0
HA A:TYR52 4.6 0.0 1.0
H A:GLU26 4.7 0.0 1.0
HZ1 A:LYS59 4.8 0.0 1.0
HB3 A:TYR52 4.8 0.0 1.0
CA A:CYS21 4.8 0.0 1.0
CB A:TYR52 4.8 0.0 1.0
H A:LYS23 4.9 0.0 1.0
H A:CYS56 4.9 0.0 1.0
NZ A:LYS59 4.9 0.0 1.0
CA A:CYS56 4.9 0.0 1.0
HA A:CYS21 5.0 0.0 1.0

Reference:

S.Eustermann, H.Videler, J.C.Yang, P.T.Cole, D.Gruszka, D.Veprintsev, D.Neuhaus. The Dna-Binding Domain of Human Parp-1 Interacts with Dna Single-Strand Breaks As A Monomer Through Its Second Zinc Finger. J.Mol.Biol. V. 407 149 2011.
ISSN: ESSN 1089-8638
PubMed: 21262234
DOI: 10.1016/J.JMB.2011.01.034
Page generated: Wed Dec 16 03:35:47 2020

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