Zinc in PDB 2k16: Solution Structure of the Free TAF3 Phd Domain

The binding sites of Zinc atom in the Solution Structure of the Free TAF3 Phd Domain (pdb code 2k16). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Free TAF3 Phd Domain, PDB code: 2k16:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Solution Structure of the Free TAF3 Phd Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Free TAF3 Phd Domain within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn940 b:0.0 occ:1.00 SG A:CYS888 2.3 0.0 1.0 SG A:CYS914 2.3 0.0 1.0 SG A:CYS885 2.3 0.0 1.0 SG A:CYS911 2.4 0.0 1.0 HB2 A:CYS914 2.6 0.0 1.0 HB2 A:CYS885 2.8 0.0 1.0 CB A:CYS885 3.0 0.0 1.0 CB A:CYS914 3.0 0.0 1.0 H A:CYS888 3.0 0.0 1.0 HB3 A:CYS885 3.0 0.0 1.0 H A:CYS911 3.2 0.0 1.0 HH A:TYR892 3.2 0.0 1.0 H A:CYS914 3.4 0.0 1.0 CB A:CYS888 3.5 0.0 1.0 HB3 A:ASP887 3.6 0.0 1.0 HB3 A:CYS888 3.6 0.0 1.0 HE1 A:TYR892 3.6 0.0 1.0 N A:CYS888 3.7 0.0 1.0 HB3 A:CYS914 3.7 0.0 1.0 HB2 A:LYS913 3.8 0.0 1.0 HZ3 A:LYS917 3.9 0.0 1.0 H A:ASP887 4.0 0.0 1.0 CB A:CYS911 4.0 0.0 1.0 N A:CYS914 4.0 0.0 1.0 OH A:TYR892 4.1 0.0 1.0 HB3 A:CYS911 4.1 0.0 1.0 N A:CYS911 4.1 0.0 1.0 CA A:CYS914 4.1 0.0 1.0 HA A:PHE910 4.2 0.0 1.0 CA A:CYS888 4.2 0.0 1.0 HD1 A:PHE910 4.2 0.0 1.0 CE1 A:TYR892 4.4 0.0 1.0 HB2 A:CYS888 4.4 0.0 1.0 CA A:CYS885 4.5 0.0 1.0 HB3 A:PHE910 4.5 0.0 1.0 CB A:ASP887 4.6 0.0 1.0 C A:ASP887 4.6 0.0 1.0 CZ A:TYR892 4.7 0.0 1.0 HB2 A:CYS911 4.7 0.0 1.0 HA A:CYS914 4.7 0.0 1.0 CA A:CYS911 4.7 0.0 1.0 H A:ASP886 4.7 0.0 1.0 N A:ASP887 4.7 0.0 1.0 HA A:CYS885 4.8 0.0 1.0 CA A:ASP887 4.9 0.0 1.0 CB A:LYS913 4.9 0.0 1.0 NZ A:LYS917 4.9 0.0 1.0 CA A:PHE910 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the Solution Structure of the Free TAF3 Phd Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Free TAF3 Phd Domain within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn941 b:0.0 occ:1.00 SG A:CYS873 2.2 0.0 1.0 ND1 A:HIS893 2.2 0.0 1.0 SG A:CYS870 2.2 0.0 1.0 HB3 A:CYS870 2.2 0.0 1.0 SG A:CYS896 2.3 0.0 1.0 CB A:CYS870 2.6 0.0 1.0 HB2 A:HIS893 2.7 0.0 1.0 HB2 A:CYS870 3.0 0.0 1.0 H A:HIS893 3.0 0.0 1.0 HB3 A:CYS873 3.1 0.0 1.0 CG A:HIS893 3.2 0.0 1.0 CE1 A:HIS893 3.3 0.0 1.0 CB A:CYS873 3.3 0.0 1.0 HB3 A:CYS896 3.3 0.0 1.0 H A:CYS873 3.4 0.0 1.0 CB A:CYS896 3.4 0.0 1.0 CB A:HIS893 3.4 0.0 1.0 HE1 A:HIS893 3.5 0.0 1.0 HB2 A:LYS875 3.6 0.0 1.0 HB2 A:CYS896 3.7 0.0 1.0 N A:HIS893 3.7 0.0 1.0 N A:CYS873 4.0 0.0 1.0 H A:LYS875 4.0 0.0 1.0 HB2 A:CYS873 4.1 0.0 1.0 CA A:CYS870 4.1 0.0 1.0 CA A:HIS893 4.1 0.0 1.0 O A:CYS870 4.2 0.0 1.0 HB3 A:HIS893 4.3 0.0 1.0 CA A:CYS873 4.3 0.0 1.0 HA A:TYR892 4.3 0.0 1.0 CD2 A:HIS893 4.4 0.0 1.0 NE2 A:HIS893 4.4 0.0 1.0 H A:GLY872 4.4 0.0 1.0 H A:ASN874 4.4 0.0 1.0 HB3 A:TYR892 4.4 0.0 1.0 HD2 A:LYS875 4.4 0.0 1.0 C A:CYS870 4.5 0.0 1.0 H A:CYS896 4.5 0.0 1.0 H A:CYS870 4.5 0.0 1.0 O A:LYS875 4.6 0.0 1.0 HD2 A:TYR892 4.6 0.0 1.0 C A:TYR892 4.6 0.0 1.0 HA3 A:GLY872 4.7 0.0 1.0 CA A:CYS896 4.7 0.0 1.0 HA A:CYS870 4.7 0.0 1.0 CB A:LYS875 4.7 0.0 1.0 N A:CYS870 4.8 0.0 1.0 O A:HIS893 4.8 0.0 1.0 HG2 A:PRO895 4.8 0.0 1.0 C A:GLY872 4.9 0.0 1.0 C A:HIS893 4.9 0.0 1.0 CA A:TYR892 4.9 0.0 1.0 N A:LYS875 4.9 0.0 1.0 HA A:CYS896 4.9 0.0 1.0 HA A:HIS893 5.0 0.0 1.0

H.Van Ingen, F.M.A.Van Schaik, H.Wienk, J.Ballering, A.Deschesne, J.Kruijzer, H.Timmers, R.Boelens. Recognition of the H3K4ME3 Mark By the TAF3-Phd Finger To Be Published.