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Zinc in PDB 2jvy: Solution Structure of the Eda-Id-Related C417F Mutant of Human Nemo Zinc Finger

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the Eda-Id-Related C417F Mutant of Human Nemo Zinc Finger (pdb code 2jvy). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Solution Structure of the Eda-Id-Related C417F Mutant of Human Nemo Zinc Finger, PDB code: 2jvy:

Zinc binding site 1 out of 1 in 2jvy

Go back to Zinc Binding Sites List in 2jvy
Zinc binding site 1 out of 1 in the Solution Structure of the Eda-Id-Related C417F Mutant of Human Nemo Zinc Finger


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Eda-Id-Related C417F Mutant of Human Nemo Zinc Finger within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn29

b:0.3
occ:1.00
NE2 A:HIS22 2.1 0.3 1.0
SG A:CYS6 2.3 0.3 1.0
SG A:CYS9 2.5 0.4 1.0
CD2 A:HIS22 2.8 0.3 1.0
HD2 A:HIS22 2.9 0.3 1.0
HB2 A:LYS8 3.0 0.6 1.0
CE1 A:HIS22 3.2 0.3 1.0
CB A:CYS6 3.4 0.2 1.0
HG12 A:VAL23 3.4 1.9 1.0
HB3 A:CYS6 3.5 0.2 1.0
HB2 A:CYS6 3.5 0.3 1.0
HE1 A:HIS22 3.6 0.3 1.0
HB2 A:CYS9 3.7 0.4 1.0
CB A:CYS9 3.8 0.4 1.0
CG A:HIS22 4.0 0.2 1.0
HA A:VAL23 4.0 0.5 1.0
CB A:LYS8 4.0 0.6 1.0
ND1 A:HIS22 4.1 0.2 1.0
H A:LYS8 4.3 0.5 1.0
HG11 A:VAL23 4.3 1.9 1.0
CG1 A:VAL23 4.4 1.3 1.0
HB3 A:TYR11 4.4 0.3 1.0
HB3 A:LYS8 4.4 0.6 1.0
HB3 A:CYS9 4.5 0.5 1.0
N A:CYS9 4.5 0.3 1.0
HG3 A:LYS8 4.5 1.1 1.0
H A:CYS9 4.6 0.2 1.0
C A:LYS8 4.7 0.3 1.0
CG A:LYS8 4.8 0.8 1.0
CA A:LYS8 4.8 0.4 1.0
CA A:CYS6 4.8 0.2 1.0
CA A:CYS9 4.8 0.3 1.0
HG2 A:LYS8 4.8 1.3 1.0
CA A:VAL23 4.9 0.5 1.0
N A:LYS8 4.9 0.3 1.0
O A:HIS22 5.0 0.4 1.0

Reference:

F.Cordier, E.Vinolo, M.Veron, M.Delepierre, F.Agou. Solution Structure of Nemo Zinc Finger and Impact of An Anhidrotic Ectodermal Dysplasia with Immunodeficiency-Related Point Mutation. J.Mol.Biol. V. 377 1419 2008.
ISSN: ISSN 0022-2836
PubMed: 18313693
DOI: 10.1016/J.JMB.2008.01.048
Page generated: Wed Dec 16 03:33:02 2020

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