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Zinc in PDB 2jrp: Solution uc(Nmr) Structure of Yfgj From Salmonella Typhimurium Modeled with Two Zn+2 Bound, Northeast Structural Genomics Consortium Target STR86

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution uc(Nmr) Structure of Yfgj From Salmonella Typhimurium Modeled with Two Zn+2 Bound, Northeast Structural Genomics Consortium Target STR86 (pdb code 2jrp). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution uc(Nmr) Structure of Yfgj From Salmonella Typhimurium Modeled with Two Zn+2 Bound, Northeast Structural Genomics Consortium Target STR86, PDB code: 2jrp:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2jrp

Go back to Zinc Binding Sites List in 2jrp
Zinc binding site 1 out of 2 in the Solution uc(Nmr) Structure of Yfgj From Salmonella Typhimurium Modeled with Two Zn+2 Bound, Northeast Structural Genomics Consortium Target STR86


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution uc(Nmr) Structure of Yfgj From Salmonella Typhimurium Modeled with Two Zn+2 Bound, Northeast Structural Genomics Consortium Target STR86 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn150

b:0.0
occ:1.00
OG1 A:THR23 1.8 0.0 1.0
SG A:CYS8 1.9 0.0 1.0
OE2 A:GLU22 2.0 0.0 1.0
O A:THR23 2.0 0.0 1.0
OE1 A:GLU22 2.0 0.0 1.0
CD A:GLU22 2.2 0.0 1.0
HG1 A:THR23 2.5 0.0 1.0
H A:THR23 2.7 0.0 1.0
C A:THR23 2.7 0.0 1.0
CB A:THR23 2.9 0.0 1.0
N A:THR23 2.9 0.0 1.0
CA A:THR23 3.0 0.0 1.0
CB A:CYS8 3.3 0.0 1.0
HB2 A:CYS8 3.4 0.0 1.0
SG A:CYS21 3.5 0.0 1.0
HB A:THR23 3.6 0.0 1.0
HG23 A:THR23 3.7 0.0 1.0
CG A:GLU22 3.7 0.0 1.0
HB3 A:CYS8 3.7 0.0 1.0
C A:GLU22 3.7 0.0 1.0
HD2 A:HIS10 3.8 0.0 1.0
HB2 A:CYS24 3.8 0.0 1.0
CG2 A:THR23 3.8 0.0 1.0
SG A:CYS24 3.9 0.0 1.0
N A:CYS24 4.0 0.0 1.0
HA A:THR23 4.0 0.0 1.0
HB3 A:CYS5 4.1 0.0 1.0
N A:GLU22 4.2 0.0 1.0
H A:GLU22 4.2 0.0 1.0
HG22 A:THR23 4.2 0.0 1.0
HG3 A:GLU22 4.2 0.0 1.0
HB2 A:GLU22 4.3 0.0 1.0
O A:CYS8 4.3 0.0 1.0
CA A:GLU22 4.3 0.0 1.0
HG2 A:GLU22 4.3 0.0 1.0
CB A:CYS24 4.3 0.0 1.0
CB A:GLU22 4.3 0.0 1.0
HB2 A:CYS5 4.3 0.0 1.0
CD2 A:HIS10 4.5 0.0 1.0
O A:GLU22 4.6 0.0 1.0
CA A:CYS8 4.6 0.0 1.0
H A:CYS24 4.6 0.0 1.0
HB2 A:HIS10 4.6 0.0 1.0
H A:CYS8 4.6 0.0 1.0
C A:CYS21 4.6 0.0 1.0
CB A:CYS5 4.6 0.0 1.0
HD13 A:LEU12 4.7 0.0 1.0
HG21 A:THR23 4.7 0.0 1.0
CA A:CYS24 4.7 0.0 1.0
H A:ALA25 4.9 0.0 1.0
C A:CYS8 4.9 0.0 1.0
SG A:CYS5 4.9 0.0 1.0
CB A:CYS21 4.9 0.0 1.0

Zinc binding site 2 out of 2 in 2jrp

Go back to Zinc Binding Sites List in 2jrp
Zinc binding site 2 out of 2 in the Solution uc(Nmr) Structure of Yfgj From Salmonella Typhimurium Modeled with Two Zn+2 Bound, Northeast Structural Genomics Consortium Target STR86


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution uc(Nmr) Structure of Yfgj From Salmonella Typhimurium Modeled with Two Zn+2 Bound, Northeast Structural Genomics Consortium Target STR86 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn200

b:0.0
occ:1.00
ND1 A:HIS58 2.0 0.0 1.0
SG A:CYS54 2.0 0.0 1.0
O A:GLY59 2.0 0.0 1.0
CE1 A:HIS58 2.8 0.0 1.0
HE1 A:HIS58 2.9 0.0 1.0
HD13 A:ILE61 2.9 0.0 1.0
HB3 A:HIS58 3.1 0.0 1.0
SG A:CYS34 3.1 0.0 1.0
C A:GLY59 3.1 0.0 1.0
CG A:HIS58 3.1 0.0 1.0
H A:GLY59 3.4 0.0 1.0
HG13 A:ILE61 3.4 0.0 1.0
N A:GLY59 3.6 0.0 1.0
CB A:HIS58 3.7 0.0 1.0
CB A:CYS54 3.7 0.0 1.0
CA A:GLY59 3.8 0.0 1.0
CD1 A:ILE61 3.8 0.0 1.0
O A:CYS54 3.8 0.0 1.0
HA3 A:GLY59 3.9 0.0 1.0
HD22 A:LEU41 3.9 0.0 1.0
HB2 A:CYS54 4.0 0.0 1.0
NE2 A:HIS58 4.0 0.0 1.0
HD12 A:ILE61 4.0 0.0 1.0
CG1 A:ILE61 4.0 0.0 1.0
CD2 A:HIS58 4.2 0.0 1.0
SG A:CYS37 4.2 0.0 1.0
HD13 A:LEU41 4.2 0.0 1.0
HG12 A:ILE61 4.2 0.0 1.0
C A:HIS58 4.2 0.0 1.0
N A:LEU60 4.2 0.0 1.0
HA A:LEU60 4.3 0.0 1.0
HB3 A:CYS54 4.3 0.0 1.0
H A:CYS54 4.3 0.0 1.0
HB2 A:HIS58 4.5 0.0 1.0
CB A:CYS34 4.6 0.0 1.0
CA A:HIS58 4.6 0.0 1.0
CA A:LEU60 4.6 0.0 1.0
C A:LEU60 4.6 0.0 1.0
CA A:CYS54 4.6 0.0 1.0
HB3 A:CYS34 4.6 0.0 1.0
C A:CYS54 4.7 0.0 1.0
HD11 A:ILE61 4.7 0.0 1.0
O A:LEU60 4.7 0.0 1.0
HA2 A:GLY59 4.8 0.0 1.0
HB2 A:CYS34 4.8 0.0 1.0
HE2 A:HIS58 4.8 0.0 1.0
N A:CYS54 4.9 0.0 1.0
CD2 A:LEU41 4.9 0.0 1.0
O A:HIS58 5.0 0.0 1.0

Reference:

K.Ding, T.A.Ramelot, J.R.Cort, H.Wang, C.Nwosu, K.Cunningham, L.Owens, L.Ma, R.Xiao, J.Liu, M.C.Baran, G.V.T.Swapna, T.B.Acton, B.Rost, G.T.Montelione, M.A.Kennedy. Solution uc(Nmr) Structure of Yfgj From Salmonella Typhimurium Modeled with Two Zn+2 Bound. To Be Published.
Page generated: Wed Dec 16 03:32:38 2020

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