Zinc in PDB 2jrj: Solution Structure of the Human PIRH2 Ring-H2 Domain. Northeast Structural Genomics Consortium Target HT2B

The binding sites of Zinc atom in the Solution Structure of the Human PIRH2 Ring-H2 Domain. Northeast Structural Genomics Consortium Target HT2B (pdb code 2jrj). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Human PIRH2 Ring-H2 Domain. Northeast Structural Genomics Consortium Target HT2B, PDB code: 2jrj:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Solution Structure of the Human PIRH2 Ring-H2 Domain. Northeast Structural Genomics Consortium Target HT2B


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Human PIRH2 Ring-H2 Domain. Northeast Structural Genomics Consortium Target HT2B within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn62 b:0.0 occ:1.00 NE2 A:HIS41 2.1 0.0 1.0 SG A:CYS44 2.3 0.0 1.0 SG A:CYS17 2.3 0.0 1.0 SG A:CYS20 2.3 0.0 1.0 HB A:ILE19 2.8 0.0 1.0 CE1 A:HIS41 3.0 0.0 1.0 CD2 A:HIS41 3.1 0.0 1.0 HE1 A:HIS41 3.3 0.0 1.0 HD2 A:HIS41 3.3 0.0 1.0 HB2 A:CYS44 3.4 0.0 1.0 HB2 A:GLU22 3.5 0.0 1.0 CB A:CYS44 3.5 0.0 1.0 HB3 A:CYS20 3.5 0.0 1.0 HB3 A:CYS17 3.5 0.0 1.0 CB A:CYS20 3.6 0.0 1.0 CB A:CYS17 3.6 0.0 1.0 H A:CYS20 3.7 0.0 1.0 HB3 A:CYS44 3.8 0.0 1.0 N A:CYS20 3.8 0.0 1.0 HB2 A:CYS17 3.9 0.0 1.0 CB A:ILE19 3.9 0.0 1.0 OE2 A:GLU22 4.0 0.0 1.0 ND1 A:HIS41 4.1 0.0 1.0 CG A:HIS41 4.2 0.0 1.0 C A:ILE19 4.2 0.0 1.0 CA A:CYS20 4.3 0.0 1.0 H A:GLU22 4.3 0.0 1.0 HG3 A:GLU22 4.4 0.0 1.0 HB2 A:CYS20 4.4 0.0 1.0 HG22 A:ILE19 4.5 0.0 1.0 CB A:GLU22 4.5 0.0 1.0 CA A:ILE19 4.5 0.0 1.0 H A:ILE19 4.6 0.0 1.0 CG2 A:ILE19 4.6 0.0 1.0 HG23 A:ILE19 4.6 0.0 1.0 HG12 A:ILE19 4.7 0.0 1.0 HG13 A:ILE19 4.7 0.0 1.0 CD A:GLU22 4.7 0.0 1.0 H A:HIS41 4.7 0.0 1.0 CG1 A:ILE19 4.7 0.0 1.0 CG A:GLU22 4.7 0.0 1.0 N A:ILE19 4.8 0.0 1.0 CA A:CYS44 4.8 0.0 1.0 O A:CYS17 4.8 0.0 1.0 C A:CYS20 4.8 0.0 1.0 OE2 A:GLU47 4.9 0.0 1.0 CA A:CYS17 4.9 0.0 1.0 O A:ILE19 4.9 0.0 1.0 HA A:CYS44 4.9 0.0 1.0

Zinc binding site 2 out of 2 in the Solution Structure of the Human PIRH2 Ring-H2 Domain. Northeast Structural Genomics Consortium Target HT2B


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Human PIRH2 Ring-H2 Domain. Northeast Structural Genomics Consortium Target HT2B within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn63 b:0.0 occ:1.00 NE2 A:HIS38 2.1 0.0 1.0 SG A:CYS58 2.3 0.0 1.0 SG A:CYS55 2.3 0.0 1.0 SG A:CYS36 2.3 0.0 1.0 CE1 A:HIS38 3.0 0.0 1.0 CD2 A:HIS38 3.1 0.0 1.0 HE1 A:HIS38 3.3 0.0 1.0 HB2 A:CYS55 3.3 0.0 1.0 HD2 A:HIS38 3.3 0.0 1.0 HB3 A:CYS36 3.3 0.0 1.0 HB2 A:CYS58 3.4 0.0 1.0 CB A:CYS58 3.5 0.0 1.0 CB A:CYS55 3.5 0.0 1.0 CB A:CYS36 3.5 0.0 1.0 HA A:CYS58 4.0 0.0 1.0 HB3 A:CYS55 4.0 0.0 1.0 HB2 A:CYS36 4.1 0.0 1.0 O A:CYS36 4.2 0.0 1.0 ND1 A:HIS38 4.2 0.0 1.0 H A:CYS58 4.2 0.0 1.0 CA A:CYS58 4.2 0.0 1.0 CG A:HIS38 4.2 0.0 1.0 O A:CYS55 4.3 0.0 1.0 HB3 A:CYS58 4.4 0.0 1.0 N A:CYS58 4.4 0.0 1.0 CA A:CYS55 4.7 0.0 1.0 CA A:CYS36 4.7 0.0 1.0 C A:CYS36 4.8 0.0 1.0 H A:CYS55 4.8 0.0 1.0 C A:CYS55 4.9 0.0 1.0

Y.Sheng, R.C.Laister, A.Lemak, B.Wu, E.Tai, S.Duan, J.Lukin, M.Sunnerhagen, S.Srisailam, M.Karra, S.Benchimol, C.H.Arrowsmith. Molecular Basis of PIRH2-Mediated P53 Ubiquitylation. Nat.Struct.Mol.Biol. V. 15 1334 2008.
ISSN: ISSN 1545-9993
PubMed: 19043414
DOI: 10.1038/NSMB.1521