Atomistry » Zinc » PDB 2ja8-2jt6 » 2jrj
Atomistry »
  Zinc »
    PDB 2ja8-2jt6 »
      2jrj »

Zinc in PDB 2jrj: Solution Structure of the Human PIRH2 Ring-H2 Domain. Northeast Structural Genomics Consortium Target HT2B

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the Human PIRH2 Ring-H2 Domain. Northeast Structural Genomics Consortium Target HT2B (pdb code 2jrj). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Human PIRH2 Ring-H2 Domain. Northeast Structural Genomics Consortium Target HT2B, PDB code: 2jrj:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2jrj

Go back to Zinc Binding Sites List in 2jrj
Zinc binding site 1 out of 2 in the Solution Structure of the Human PIRH2 Ring-H2 Domain. Northeast Structural Genomics Consortium Target HT2B


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Human PIRH2 Ring-H2 Domain. Northeast Structural Genomics Consortium Target HT2B within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn62

b:0.0
occ:1.00
NE2 A:HIS41 2.1 0.0 1.0
SG A:CYS44 2.3 0.0 1.0
SG A:CYS17 2.3 0.0 1.0
SG A:CYS20 2.3 0.0 1.0
HB A:ILE19 2.8 0.0 1.0
CE1 A:HIS41 3.0 0.0 1.0
CD2 A:HIS41 3.1 0.0 1.0
HE1 A:HIS41 3.3 0.0 1.0
HD2 A:HIS41 3.3 0.0 1.0
HB2 A:CYS44 3.4 0.0 1.0
HB2 A:GLU22 3.5 0.0 1.0
CB A:CYS44 3.5 0.0 1.0
HB3 A:CYS20 3.5 0.0 1.0
HB3 A:CYS17 3.5 0.0 1.0
CB A:CYS20 3.6 0.0 1.0
CB A:CYS17 3.6 0.0 1.0
H A:CYS20 3.7 0.0 1.0
HB3 A:CYS44 3.8 0.0 1.0
N A:CYS20 3.8 0.0 1.0
HB2 A:CYS17 3.9 0.0 1.0
CB A:ILE19 3.9 0.0 1.0
OE2 A:GLU22 4.0 0.0 1.0
ND1 A:HIS41 4.1 0.0 1.0
CG A:HIS41 4.2 0.0 1.0
C A:ILE19 4.2 0.0 1.0
CA A:CYS20 4.3 0.0 1.0
H A:GLU22 4.3 0.0 1.0
HG3 A:GLU22 4.4 0.0 1.0
HB2 A:CYS20 4.4 0.0 1.0
HG22 A:ILE19 4.5 0.0 1.0
CB A:GLU22 4.5 0.0 1.0
CA A:ILE19 4.5 0.0 1.0
H A:ILE19 4.6 0.0 1.0
CG2 A:ILE19 4.6 0.0 1.0
HG23 A:ILE19 4.6 0.0 1.0
HG12 A:ILE19 4.7 0.0 1.0
HG13 A:ILE19 4.7 0.0 1.0
CD A:GLU22 4.7 0.0 1.0
H A:HIS41 4.7 0.0 1.0
CG1 A:ILE19 4.7 0.0 1.0
CG A:GLU22 4.7 0.0 1.0
N A:ILE19 4.8 0.0 1.0
CA A:CYS44 4.8 0.0 1.0
O A:CYS17 4.8 0.0 1.0
C A:CYS20 4.8 0.0 1.0
OE2 A:GLU47 4.9 0.0 1.0
CA A:CYS17 4.9 0.0 1.0
O A:ILE19 4.9 0.0 1.0
HA A:CYS44 4.9 0.0 1.0

Zinc binding site 2 out of 2 in 2jrj

Go back to Zinc Binding Sites List in 2jrj
Zinc binding site 2 out of 2 in the Solution Structure of the Human PIRH2 Ring-H2 Domain. Northeast Structural Genomics Consortium Target HT2B


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Human PIRH2 Ring-H2 Domain. Northeast Structural Genomics Consortium Target HT2B within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn63

b:0.0
occ:1.00
NE2 A:HIS38 2.1 0.0 1.0
SG A:CYS58 2.3 0.0 1.0
SG A:CYS55 2.3 0.0 1.0
SG A:CYS36 2.3 0.0 1.0
CE1 A:HIS38 3.0 0.0 1.0
CD2 A:HIS38 3.1 0.0 1.0
HE1 A:HIS38 3.3 0.0 1.0
HB2 A:CYS55 3.3 0.0 1.0
HD2 A:HIS38 3.3 0.0 1.0
HB3 A:CYS36 3.3 0.0 1.0
HB2 A:CYS58 3.4 0.0 1.0
CB A:CYS58 3.5 0.0 1.0
CB A:CYS55 3.5 0.0 1.0
CB A:CYS36 3.5 0.0 1.0
HA A:CYS58 4.0 0.0 1.0
HB3 A:CYS55 4.0 0.0 1.0
HB2 A:CYS36 4.1 0.0 1.0
O A:CYS36 4.2 0.0 1.0
ND1 A:HIS38 4.2 0.0 1.0
H A:CYS58 4.2 0.0 1.0
CA A:CYS58 4.2 0.0 1.0
CG A:HIS38 4.2 0.0 1.0
O A:CYS55 4.3 0.0 1.0
HB3 A:CYS58 4.4 0.0 1.0
N A:CYS58 4.4 0.0 1.0
CA A:CYS55 4.7 0.0 1.0
CA A:CYS36 4.7 0.0 1.0
C A:CYS36 4.8 0.0 1.0
H A:CYS55 4.8 0.0 1.0
C A:CYS55 4.9 0.0 1.0

Reference:

Y.Sheng, R.C.Laister, A.Lemak, B.Wu, E.Tai, S.Duan, J.Lukin, M.Sunnerhagen, S.Srisailam, M.Karra, S.Benchimol, C.H.Arrowsmith. Molecular Basis of PIRH2-Mediated P53 Ubiquitylation. Nat.Struct.Mol.Biol. V. 15 1334 2008.
ISSN: ISSN 1545-9993
PubMed: 19043414
DOI: 10.1038/NSMB.1521
Page generated: Wed Dec 16 03:32:39 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy