Atomistry » Zinc » PDB 2ja8-2jt6 » 2jox
Atomistry »
  Zinc »
    PDB 2ja8-2jt6 »
      2jox »

Zinc in PDB 2jox: Embryonic Neural Inducing Factor Churchill Is Not A Dna- Binding Zinc Finger Protein: Solution Structure Reveals A Solvent-Exposed Beta-Sheet and Zinc Binuclear Cluster

Zinc Binding Sites:

The binding sites of Zinc atom in the Embryonic Neural Inducing Factor Churchill Is Not A Dna- Binding Zinc Finger Protein: Solution Structure Reveals A Solvent-Exposed Beta-Sheet and Zinc Binuclear Cluster (pdb code 2jox). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 3 binding sites of Zinc where determined in the Embryonic Neural Inducing Factor Churchill Is Not A Dna- Binding Zinc Finger Protein: Solution Structure Reveals A Solvent-Exposed Beta-Sheet and Zinc Binuclear Cluster, PDB code: 2jox:
Jump to Zinc binding site number: 1; 2; 3;

Zinc binding site 1 out of 3 in 2jox

Go back to Zinc Binding Sites List in 2jox
Zinc binding site 1 out of 3 in the Embryonic Neural Inducing Factor Churchill Is Not A Dna- Binding Zinc Finger Protein: Solution Structure Reveals A Solvent-Exposed Beta-Sheet and Zinc Binuclear Cluster


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Embryonic Neural Inducing Factor Churchill Is Not A Dna- Binding Zinc Finger Protein: Solution Structure Reveals A Solvent-Exposed Beta-Sheet and Zinc Binuclear Cluster within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn108

b:0.0
occ:1.00
NE2 A:HIS66 2.1 0.0 1.0
SG A:CYS5 2.3 0.0 1.0
SG A:CYS2 2.3 0.0 1.0
SG A:CYS30 2.3 0.0 1.0
H A:ALA31 2.4 0.0 1.0
H1 A:CYS2 2.5 0.0 1.0
CD2 A:HIS66 2.8 0.0 1.0
HD2 A:HIS66 2.9 0.0 1.0
H A:VAL32 2.9 0.0 1.0
HA A:CYS30 3.0 0.0 1.0
CE1 A:HIS66 3.2 0.0 1.0
N A:ALA31 3.4 0.0 1.0
HG23 A:VAL32 3.5 0.0 1.0
N A:CYS2 3.5 0.0 1.0
HG12 A:ILE68 3.5 0.0 1.0
CB A:CYS30 3.6 0.0 1.0
HE1 A:HIS66 3.6 0.0 1.0
CA A:CYS30 3.6 0.0 1.0
CB A:CYS2 3.7 0.0 1.0
HB A:VAL32 3.8 0.0 1.0
HA A:ILE68 3.8 0.0 1.0
N A:VAL32 3.8 0.0 1.0
CG A:HIS66 4.0 0.0 1.0
HB3 A:CYS2 4.0 0.0 1.0
C A:CYS30 4.0 0.0 1.0
HB2 A:CYS30 4.1 0.0 1.0
CB A:CYS5 4.1 0.0 1.0
ND1 A:HIS66 4.2 0.0 1.0
CA A:CYS2 4.2 0.0 1.0
CG2 A:VAL32 4.3 0.0 1.0
CA A:ALA31 4.4 0.0 1.0
CB A:VAL32 4.4 0.0 1.0
HB3 A:CYS30 4.4 0.0 1.0
HG21 A:VAL32 4.5 0.0 1.0
ZN A:ZN109 4.5 0.0 1.0
HB3 A:ALA31 4.5 0.0 1.0
HB2 A:CYS5 4.5 0.0 1.0
CG1 A:ILE68 4.5 0.0 1.0
C A:ALA31 4.5 0.0 1.0
HB2 A:CYS2 4.6 0.0 1.0
HE1 A:PHE27 4.6 0.0 1.0
HB3 A:CYS5 4.6 0.0 1.0
H A:CYS5 4.6 0.0 1.0
HG13 A:ILE68 4.7 0.0 1.0
HA A:CYS5 4.7 0.0 1.0
CA A:VAL32 4.7 0.0 1.0
HB2 A:CYS61 4.8 0.0 1.0
HG22 A:ILE68 4.8 0.0 1.0
H A:CYS33 4.8 0.0 1.0
HB2 A:ALA31 4.8 0.0 1.0
CB A:ALA31 4.8 0.0 1.0
CA A:ILE68 4.8 0.0 1.0
CA A:CYS5 4.9 0.0 1.0
N A:CYS30 4.9 0.0 1.0
HA A:CYS2 5.0 0.0 1.0

Zinc binding site 2 out of 3 in 2jox

Go back to Zinc Binding Sites List in 2jox
Zinc binding site 2 out of 3 in the Embryonic Neural Inducing Factor Churchill Is Not A Dna- Binding Zinc Finger Protein: Solution Structure Reveals A Solvent-Exposed Beta-Sheet and Zinc Binuclear Cluster


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Embryonic Neural Inducing Factor Churchill Is Not A Dna- Binding Zinc Finger Protein: Solution Structure Reveals A Solvent-Exposed Beta-Sheet and Zinc Binuclear Cluster within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn109

b:0.0
occ:1.00
SG A:CYS33 2.3 0.0 1.0
SG A:CYS64 2.3 0.0 1.0
SG A:CYS61 2.3 0.0 1.0
SG A:CYS30 2.3 0.0 1.0
HB2 A:CYS30 2.9 0.0 1.0
HB3 A:CYS30 2.9 0.0 1.0
CB A:CYS30 2.9 0.0 1.0
H A:CYS33 3.1 0.0 1.0
CB A:CYS61 3.2 0.0 1.0
HB2 A:CYS61 3.2 0.0 1.0
HD2 A:HIS66 3.3 0.0 1.0
HB3 A:CYS61 3.3 0.0 1.0
H A:CYS64 3.4 0.0 1.0
HB A:VAL32 3.4 0.0 1.0
CB A:CYS33 3.6 0.0 1.0
HB3 A:CYS33 3.6 0.0 1.0
HB3 A:ASN63 3.8 0.0 1.0
HD21 A:ASN63 3.8 0.0 1.0
N A:CYS33 3.8 0.0 1.0
CB A:CYS64 3.9 0.0 1.0
H A:VAL32 4.0 0.0 1.0
H A:LYS35 4.0 0.0 1.0
HB3 A:CYS64 4.0 0.0 1.0
HB2 A:LYS35 4.0 0.0 1.0
HB3 A:HIS66 4.0 0.0 1.0
H A:SER34 4.2 0.0 1.0
CD2 A:HIS66 4.2 0.0 1.0
N A:CYS64 4.3 0.0 1.0
CA A:CYS33 4.3 0.0 1.0
CB A:VAL32 4.4 0.0 1.0
CA A:CYS30 4.4 0.0 1.0
HB2 A:CYS33 4.5 0.0 1.0
HG11 A:VAL32 4.5 0.0 1.0
ZN A:ZN108 4.5 0.0 1.0
HB2 A:CYS64 4.6 0.0 1.0
C A:VAL32 4.6 0.0 1.0
H A:ALA31 4.6 0.0 1.0
H A:HIS66 4.7 0.0 1.0
CA A:CYS64 4.7 0.0 1.0
CA A:CYS61 4.7 0.0 1.0
N A:VAL32 4.7 0.0 1.0
H A:ASN63 4.8 0.0 1.0
HD13 A:ILE68 4.8 0.0 1.0
HA A:CYS30 4.8 0.0 1.0
CA A:VAL32 4.8 0.0 1.0
ND2 A:ASN63 4.8 0.0 1.0
N A:SER34 4.8 0.0 1.0
CB A:ASN63 4.8 0.0 1.0
CG1 A:VAL32 4.9 0.0 1.0
C A:CYS33 4.9 0.0 1.0
HA A:CYS61 4.9 0.0 1.0
H A:CYS30 4.9 0.0 1.0

Zinc binding site 3 out of 3 in 2jox

Go back to Zinc Binding Sites List in 2jox
Zinc binding site 3 out of 3 in the Embryonic Neural Inducing Factor Churchill Is Not A Dna- Binding Zinc Finger Protein: Solution Structure Reveals A Solvent-Exposed Beta-Sheet and Zinc Binuclear Cluster


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Embryonic Neural Inducing Factor Churchill Is Not A Dna- Binding Zinc Finger Protein: Solution Structure Reveals A Solvent-Exposed Beta-Sheet and Zinc Binuclear Cluster within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn110

b:0.0
occ:1.00
ND1 A:HIS71 2.1 0.0 1.0
NE2 A:HIS59 2.1 0.0 1.0
SG A:CYS88 2.3 0.0 1.0
SG A:CYS91 2.3 0.0 1.0
HB2 A:CYS91 2.6 0.0 1.0
H A:CYS91 2.8 0.0 1.0
CE1 A:HIS59 2.8 0.0 1.0
HE1 A:HIS59 2.8 0.0 1.0
HB2 A:HIS71 2.9 0.0 1.0
CB A:CYS91 3.0 0.0 1.0
CE1 A:HIS71 3.1 0.0 1.0
CG A:HIS71 3.1 0.0 1.0
HB2 A:CYS88 3.2 0.0 1.0
HE1 A:HIS71 3.3 0.0 1.0
CB A:CYS88 3.3 0.0 1.0
CD2 A:HIS59 3.3 0.0 1.0
HB3 A:LEU90 3.5 0.0 1.0
CB A:HIS71 3.5 0.0 1.0
HB3 A:CYS88 3.6 0.0 1.0
N A:CYS91 3.7 0.0 1.0
HD2 A:HIS59 3.8 0.0 1.0
HB3 A:CYS91 3.8 0.0 1.0
CA A:CYS91 3.9 0.0 1.0
ND1 A:HIS59 4.1 0.0 1.0
HD21 A:LEU90 4.1 0.0 1.0
HA A:HIS71 4.1 0.0 1.0
HH A:TYR57 4.2 0.0 1.0
HE2 A:TYR57 4.2 0.0 1.0
NE2 A:HIS71 4.2 0.0 1.0
H A:LEU90 4.2 0.0 1.0
CD2 A:HIS71 4.3 0.0 1.0
CG A:HIS59 4.3 0.0 1.0
HA A:SER22 4.3 0.0 1.0
HB3 A:HIS71 4.3 0.0 1.0
CA A:HIS71 4.4 0.0 1.0
HG A:LEU90 4.5 0.0 1.0
CB A:LEU90 4.5 0.0 1.0
HA A:CYS91 4.5 0.0 1.0
CE2 A:TYR57 4.6 0.0 1.0
OH A:TYR57 4.6 0.0 1.0
H A:PHE23 4.7 0.0 1.0
CA A:CYS88 4.7 0.0 1.0
O A:GLY21 4.7 0.0 1.0
H A:GLY92 4.7 0.0 1.0
C A:LEU90 4.8 0.0 1.0
CZ A:TYR57 4.8 0.0 1.0
HD1 A:HIS59 4.9 0.0 1.0
HA A:CYS88 4.9 0.0 1.0
CG A:LEU90 4.9 0.0 1.0
N A:HIS71 4.9 0.0 1.0
CD2 A:LEU90 5.0 0.0 1.0

Reference:

B.M.Lee, B.A.Buck-Koehntop, M.A.Martinez-Yamout, H.J.Dyson, P.E.Wright. Embryonic Neural Inducing Factor Churchill Is Not A Dna-Binding Zinc Finger Protein: Solution Structure Reveals A Solvent-Exposed Beta-Sheet and Zinc Binuclear Cluster J.Mol.Biol. V. 371 1274 2007.
ISSN: ISSN 0022-2836
PubMed: 17610897
DOI: 10.1016/J.JMB.2007.06.021
Page generated: Thu Oct 17 01:19:03 2024

Last articles

Zn in 9FD2
Zn in 9GUW
Zn in 9GUX
Zn in 9F7C
Zn in 9GUR
Zn in 9F7A
Zn in 9DDE
Zn in 9DBY
Zn in 9EBZ
Zn in 9DGG
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy