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Zinc in PDB 2j2s: Solution Structure of the Nonmethyl-Cpg-Binding Cxxc Domain of the Leukaemia-Associated Mll Histone Methyltransferase

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the Nonmethyl-Cpg-Binding Cxxc Domain of the Leukaemia-Associated Mll Histone Methyltransferase (pdb code 2j2s). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Nonmethyl-Cpg-Binding Cxxc Domain of the Leukaemia-Associated Mll Histone Methyltransferase, PDB code: 2j2s:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2j2s

Go back to Zinc Binding Sites List in 2j2s
Zinc binding site 1 out of 2 in the Solution Structure of the Nonmethyl-Cpg-Binding Cxxc Domain of the Leukaemia-Associated Mll Histone Methyltransferase


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Nonmethyl-Cpg-Binding Cxxc Domain of the Leukaemia-Associated Mll Histone Methyltransferase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn2215

b:0.0
occ:1.00
HG A:CYS1167 1.8 0.0 1.0
SG A:CYS1167 2.2 0.0 1.0
SG A:CYS1170 2.2 0.0 1.0
SG A:CYS1173 2.3 0.0 1.0
SG A:CYS1189 2.3 0.0 1.0
HG A:CYS1170 2.9 0.0 1.0
H A:CYS1167 3.0 0.0 1.0
HB2 A:CYS1173 3.0 0.0 1.0
H A:MET1191 3.2 0.0 1.0
H A:GLY1168 3.3 0.0 1.0
CB A:CYS1173 3.3 0.0 1.0
HA A:CYS1189 3.3 0.0 1.0
H A:LYS1190 3.3 0.0 1.0
H A:CYS1170 3.4 0.0 1.0
CB A:CYS1189 3.4 0.0 1.0
HB2 A:CYS1189 3.4 0.0 1.0
HB3 A:CYS1170 3.4 0.0 1.0
CB A:CYS1167 3.5 0.0 1.0
CB A:CYS1170 3.5 0.0 1.0
HB3 A:CYS1167 3.5 0.0 1.0
N A:CYS1167 3.6 0.0 1.0
H A:CYS1173 3.7 0.0 1.0
CA A:CYS1189 3.8 0.0 1.0
H A:VAL1169 3.8 0.0 1.0
HG3 A:MET1191 3.9 0.0 1.0
N A:LYS1190 3.9 0.0 1.0
HB2 A:MET1191 3.9 0.0 1.0
HG2 A:MET1191 3.9 0.0 1.0
HB3 A:CYS1173 4.0 0.0 1.0
CA A:CYS1167 4.1 0.0 1.0
N A:GLY1168 4.1 0.0 1.0
N A:CYS1170 4.1 0.0 1.0
C A:CYS1189 4.2 0.0 1.0
N A:MET1191 4.2 0.0 1.0
HA A:ASP1166 4.2 0.0 1.0
HB2 A:ASN1172 4.2 0.0 1.0
HB2 A:LYS1190 4.3 0.0 1.0
N A:CYS1173 4.3 0.0 1.0
HB2 A:CYS1170 4.3 0.0 1.0
CG A:MET1191 4.3 0.0 1.0
HB3 A:CYS1189 4.3 0.0 1.0
HB2 A:CYS1167 4.3 0.0 1.0
CA A:CYS1173 4.4 0.0 1.0
CA A:CYS1170 4.4 0.0 1.0
HB3 A:ASP1166 4.5 0.0 1.0
C A:ASP1166 4.6 0.0 1.0
C A:CYS1167 4.6 0.0 1.0
CB A:MET1191 4.6 0.0 1.0
HG21 A:VAL1169 4.6 0.0 1.0
HG3 A:LYS1190 4.7 0.0 1.0
H A:ARG1192 4.7 0.0 1.0
HA A:CYS1173 4.7 0.0 1.0
N A:VAL1169 4.7 0.0 1.0
CA A:LYS1190 4.8 0.0 1.0
CA A:ASP1166 4.8 0.0 1.0
HG3 A:ARG1192 4.9 0.0 1.0
O A:CYS1170 4.9 0.0 1.0
CB A:LYS1190 5.0 0.0 1.0
C A:CYS1170 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 2j2s

Go back to Zinc Binding Sites List in 2j2s
Zinc binding site 2 out of 2 in the Solution Structure of the Nonmethyl-Cpg-Binding Cxxc Domain of the Leukaemia-Associated Mll Histone Methyltransferase


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Nonmethyl-Cpg-Binding Cxxc Domain of the Leukaemia-Associated Mll Histone Methyltransferase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn2216

b:0.0
occ:1.00
HG A:CYS1158 1.7 0.0 1.0
SG A:CYS1161 2.2 0.0 1.0
SG A:CYS1158 2.3 0.0 1.0
SG A:CYS1155 2.3 0.0 1.0
SG A:CYS1194 2.3 0.0 1.0
H A:GLY1156 2.4 0.0 1.0
HG A:CYS1155 2.6 0.0 1.0
HB2 A:CYS1161 3.0 0.0 1.0
H A:CYS1155 3.1 0.0 1.0
H A:CYS1158 3.2 0.0 1.0
HB3 A:ARG1154 3.2 0.0 1.0
CB A:CYS1161 3.2 0.0 1.0
H A:CYS1161 3.2 0.0 1.0
HB2 A:CYS1194 3.3 0.0 1.0
H A:GLN1157 3.3 0.0 1.0
HB3 A:CYS1158 3.4 0.0 1.0
CB A:CYS1194 3.4 0.0 1.0
N A:GLY1156 3.4 0.0 1.0
CB A:CYS1158 3.5 0.0 1.0
H A:GLN1195 3.5 0.0 1.0
H A:ASN1196 3.5 0.0 1.0
HA A:CYS1194 3.5 0.0 1.0
N A:CYS1155 3.6 0.0 1.0
O A:ASN1196 3.7 0.0 1.0
CB A:CYS1155 3.8 0.0 1.0
N A:CYS1158 3.9 0.0 1.0
CA A:CYS1194 4.0 0.0 1.0
N A:CYS1161 4.0 0.0 1.0
HB3 A:CYS1161 4.0 0.0 1.0
CA A:CYS1155 4.1 0.0 1.0
HA2 A:GLY1156 4.1 0.0 1.0
N A:GLN1157 4.2 0.0 1.0
CA A:CYS1161 4.2 0.0 1.0
CB A:ARG1154 4.2 0.0 1.0
N A:GLN1195 4.2 0.0 1.0
CA A:CYS1158 4.2 0.0 1.0
C A:CYS1155 4.2 0.0 1.0
CA A:GLY1156 4.3 0.0 1.0
HB2 A:CYS1158 4.3 0.0 1.0
HA A:ARG1154 4.3 0.0 1.0
HB3 A:CYS1194 4.3 0.0 1.0
C A:ARG1154 4.3 0.0 1.0
HB3 A:CYS1155 4.4 0.0 1.0
N A:ASN1196 4.4 0.0 1.0
HD22 A:LEU1197 4.5 0.0 1.0
HB2 A:CYS1155 4.5 0.0 1.0
CA A:ARG1154 4.5 0.0 1.0
HB3 A:ASN1196 4.5 0.0 1.0
HA A:CYS1161 4.6 0.0 1.0
C A:ASN1196 4.6 0.0 1.0
C A:CYS1194 4.6 0.0 1.0
HB2 A:ARG1154 4.6 0.0 1.0
H A:GLY1160 4.7 0.0 1.0
C A:GLY1156 4.7 0.0 1.0
HG A:LEU1197 4.8 0.0 1.0
C A:CYS1158 4.9 0.0 1.0
C A:GLN1157 4.9 0.0 1.0
HG2 A:ARG1154 5.0 0.0 1.0
HA3 A:GLY1160 5.0 0.0 1.0
O A:CYS1158 5.0 0.0 1.0

Reference:

M.D.Allen, C.G.Grummitt, C.Hilcenko, S.Y.Min, L.M.Tonkin, C.M.Johnson, S.M.Freund, M.Bycroft, A.J.Warren. Solution Structure of the Nonmethyl-Cpg-Binding Cxxc Domain of the Leukaemia-Associated Mll Histone Methyltransferase Embo J. V. 25 4503 2006.
ISSN: ISSN 0261-4189
PubMed: 16990798
DOI: 10.1038/SJ.EMBOJ.7601340
Page generated: Wed Dec 16 03:31:38 2020

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