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Zinc in PDB 2inp: Structure of the Phenol Hydroxylase-Regulatory Protein Complex

Protein crystallography data

The structure of Structure of the Phenol Hydroxylase-Regulatory Protein Complex, PDB code: 2inp was solved by M.S.Sazinsky, P.W.Dunten, M.S.Mccormick, S.J.Lippard, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 2.30
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 87.751, 146.305, 190.020, 90.00, 90.00, 90.00
R / Rfree (%) 19.2 / 23.6

Other elements in 2inp:

The structure of Structure of the Phenol Hydroxylase-Regulatory Protein Complex also contains other interesting chemical elements:

Iron (Fe) 4 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of the Phenol Hydroxylase-Regulatory Protein Complex (pdb code 2inp). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of the Phenol Hydroxylase-Regulatory Protein Complex, PDB code: 2inp:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2inp

Go back to Zinc Binding Sites List in 2inp
Zinc binding site 1 out of 2 in the Structure of the Phenol Hydroxylase-Regulatory Protein Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of the Phenol Hydroxylase-Regulatory Protein Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn2

b:36.0
occ:1.00
SG A:CYS399 2.3 37.3 1.0
SG A:CYS402 2.3 32.1 1.0
SG A:CYS432 2.3 41.3 1.0
SG A:CYS436 2.3 38.2 1.0
CB A:CYS399 3.1 37.8 1.0
CB A:CYS436 3.2 37.6 1.0
CB A:CYS402 3.4 32.8 1.0
CB A:CYS432 3.5 39.9 1.0
N A:CYS402 3.6 32.9 1.0
N A:CYS432 4.0 37.9 1.0
CA A:CYS402 4.0 32.4 1.0
NE A:ARG271 4.2 33.9 1.0
CA A:CYS432 4.3 38.9 1.0
OG A:SER433 4.4 40.0 1.0
CD A:ARG271 4.5 36.1 1.0
CA A:CYS399 4.5 36.6 1.0
CG A:ARG271 4.6 31.3 1.0
CA A:CYS436 4.7 37.9 1.0
C A:VAL401 4.7 33.9 1.0
N A:GLN403 4.7 32.5 1.0
C A:CYS402 4.8 33.3 1.0
CB A:VAL401 4.9 33.5 1.0
C A:CYS432 4.9 39.5 1.0
NE1 A:TRP267 5.0 28.2 1.0
N A:SER433 5.0 39.6 1.0

Zinc binding site 2 out of 2 in 2inp

Go back to Zinc Binding Sites List in 2inp
Zinc binding site 2 out of 2 in the Structure of the Phenol Hydroxylase-Regulatory Protein Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of the Phenol Hydroxylase-Regulatory Protein Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn500

b:33.9
occ:1.00
SG B:CYS436 2.2 30.8 1.0
SG B:CYS402 2.4 31.1 1.0
SG B:CYS399 2.4 29.1 1.0
SG B:CYS432 2.4 33.1 1.0
CB B:CYS399 3.2 28.4 1.0
CB B:CYS436 3.2 31.1 1.0
CB B:CYS402 3.4 28.3 1.0
N B:CYS402 3.7 28.4 1.0
CB B:CYS432 3.8 30.1 1.0
N B:CYS432 4.0 30.1 1.0
CA B:CYS402 4.1 30.0 1.0
NE B:ARG271 4.3 30.9 1.0
CA B:CYS432 4.4 31.8 1.0
OG B:SER433 4.5 31.4 1.0
CG B:ARG271 4.5 28.5 1.0
CA B:CYS399 4.6 29.8 1.0
CA B:CYS436 4.7 31.3 1.0
CD B:ARG271 4.7 28.0 1.0
C B:VAL401 4.8 28.0 1.0
N B:GLN403 4.8 28.5 1.0
CB B:VAL401 4.8 28.1 1.0
C B:CYS402 4.9 29.6 1.0
NE1 B:TRP267 4.9 27.4 1.0
N B:VAL401 5.0 27.8 1.0

Reference:

M.H.Sazinsky, P.W.Dunten, M.S.Mccormick, A.Didonato, S.J.Lippard. X-Ray Structure of A Hydroxylase-Regulatory Protein Complex From A Hydrocarbon-Oxidizing Multicomponent Monooxygenase, Pseudomonas Sp. OX1 Phenol Hydroxylase. Biochemistry V. 45 15392 2006.
ISSN: ISSN 0006-2960
PubMed: 17176061
DOI: 10.1021/BI0618969
Page generated: Wed Dec 16 03:31:22 2020

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