Atomistry » Zinc » PDB 2i9w-2iul » 2ida
Atomistry »
  Zinc »
    PDB 2i9w-2iul »
      2ida »

Zinc in PDB 2ida: Solution uc(Nmr) Structure of Protein RPA1320 From Rhodopseudomonas Palustris. Northeast Structural Genomics Consortium Target RPT3; Ontario Center For Structural Proteomics Target RP1313.

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution uc(Nmr) Structure of Protein RPA1320 From Rhodopseudomonas Palustris. Northeast Structural Genomics Consortium Target RPT3; Ontario Center For Structural Proteomics Target RP1313. (pdb code 2ida). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution uc(Nmr) Structure of Protein RPA1320 From Rhodopseudomonas Palustris. Northeast Structural Genomics Consortium Target RPT3; Ontario Center For Structural Proteomics Target RP1313., PDB code: 2ida:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2ida

Go back to Zinc Binding Sites List in 2ida
Zinc binding site 1 out of 2 in the Solution uc(Nmr) Structure of Protein RPA1320 From Rhodopseudomonas Palustris. Northeast Structural Genomics Consortium Target RPT3; Ontario Center For Structural Proteomics Target RP1313.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution uc(Nmr) Structure of Protein RPA1320 From Rhodopseudomonas Palustris. Northeast Structural Genomics Consortium Target RPT3; Ontario Center For Structural Proteomics Target RP1313. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn103

b:0.0
occ:1.00
OD1 A:ASP81 1.9 0.0 1.0
ND1 A:HIS7 2.1 0.0 1.0
SG A:CYS5 2.3 0.0 1.0
SG A:CYS78 2.4 0.0 1.0
CG A:ASP81 2.6 0.0 1.0
HB2 A:HIS7 2.8 0.0 1.0
OD2 A:ASP81 3.0 0.0 1.0
CE1 A:HIS7 3.1 0.0 1.0
CG A:HIS7 3.1 0.0 1.0
HG23 A:VAL80 3.2 0.0 1.0
HE1 A:HIS7 3.3 0.0 1.0
CB A:HIS7 3.4 0.0 1.0
HB2 A:CYS5 3.5 0.0 1.0
HB3 A:CYS78 3.5 0.0 1.0
CB A:CYS5 3.6 0.0 1.0
CB A:CYS78 3.6 0.0 1.0
HB2 A:ASP81 3.6 0.0 1.0
CB A:ASP81 3.7 0.0 1.0
HB2 A:CYS78 3.8 0.0 1.0
HB3 A:CYS5 3.9 0.0 1.0
H A:HIS7 3.9 0.0 1.0
HG21 A:VAL80 3.9 0.0 1.0
CG2 A:VAL80 3.9 0.0 1.0
HB3 A:HIS7 4.0 0.0 1.0
HG22 A:VAL80 4.1 0.0 1.0
HD11 A:ILE65 4.2 0.0 1.0
NE2 A:HIS7 4.2 0.0 1.0
CD2 A:HIS7 4.2 0.0 1.0
H A:ASP81 4.3 0.0 1.0
HB3 A:ASP81 4.4 0.0 1.0
N A:ASP81 4.6 0.0 1.0
HB2 A:PRO64 4.6 0.0 1.0
HD2 A:ARG6 4.6 0.0 1.0
HH11 A:ARG6 4.6 0.0 1.0
N A:HIS7 4.6 0.0 1.0
CA A:HIS7 4.7 0.0 1.0
HG13 A:ILE65 4.7 0.0 1.0
HG12 A:ILE65 4.7 0.0 1.0
HG22 A:VAL83 4.7 0.0 1.0
CA A:ASP81 4.7 0.0 1.0
CA A:CYS5 4.9 0.0 1.0
CA A:CYS78 4.9 0.0 1.0

Zinc binding site 2 out of 2 in 2ida

Go back to Zinc Binding Sites List in 2ida
Zinc binding site 2 out of 2 in the Solution uc(Nmr) Structure of Protein RPA1320 From Rhodopseudomonas Palustris. Northeast Structural Genomics Consortium Target RPT3; Ontario Center For Structural Proteomics Target RP1313.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution uc(Nmr) Structure of Protein RPA1320 From Rhodopseudomonas Palustris. Northeast Structural Genomics Consortium Target RPT3; Ontario Center For Structural Proteomics Target RP1313. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn104

b:0.0
occ:1.00
NE2 A:HIS57 2.1 0.0 1.0
ND1 A:HIS63 2.1 0.0 1.0
SG A:CYS37 2.3 0.0 1.0
SG A:CYS40 2.4 0.0 1.0
CE1 A:HIS57 3.1 0.0 1.0
HB2 A:HIS63 3.1 0.0 1.0
CE1 A:HIS63 3.1 0.0 1.0
CD2 A:HIS57 3.1 0.0 1.0
CG A:HIS63 3.1 0.0 1.0
HE1 A:HIS63 3.3 0.0 1.0
HE1 A:HIS57 3.3 0.0 1.0
HD2 A:HIS57 3.3 0.0 1.0
HB2 A:CYS37 3.4 0.0 1.0
HB3 A:CYS40 3.4 0.0 1.0
CB A:CYS37 3.5 0.0 1.0
CB A:HIS63 3.5 0.0 1.0
CB A:CYS40 3.6 0.0 1.0
HB3 A:HIS63 3.6 0.0 1.0
H A:CYS40 3.7 0.0 1.0
HB3 A:HIS42 3.8 0.0 1.0
HB3 A:CYS37 3.8 0.0 1.0
OG1 A:THR61 3.8 0.0 1.0
HG23 A:THR61 4.0 0.0 1.0
H A:HIS42 4.1 0.0 1.0
ND1 A:HIS57 4.2 0.0 1.0
NE2 A:HIS63 4.2 0.0 1.0
CG A:HIS57 4.2 0.0 1.0
CD2 A:HIS63 4.3 0.0 1.0
HG1 A:THR61 4.3 0.0 1.0
HB2 A:CYS40 4.3 0.0 1.0
HB A:THR61 4.3 0.0 1.0
HB2 A:HIS42 4.4 0.0 1.0
HB A:THR39 4.4 0.0 1.0
N A:CYS40 4.5 0.0 1.0
CB A:THR61 4.5 0.0 1.0
CB A:HIS42 4.6 0.0 1.0
CA A:CYS40 4.6 0.0 1.0
H A:CYS37 4.7 0.0 1.0
CG2 A:THR61 4.8 0.0 1.0
H A:GLY41 4.8 0.0 1.0
CA A:CYS37 4.9 0.0 1.0
O A:HIS42 4.9 0.0 1.0
N A:HIS42 4.9 0.0 1.0
CA A:HIS63 5.0 0.0 1.0

Reference:

A.Lemak, A.Yee, J.A.Lukin, M.Karra, A.Gutmanas, C.H.Arrowsmith. Solution Structure of RPA1320 To Be Published.
Page generated: Thu Oct 17 00:53:25 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy