Zinc in PDB 2ida: Solution uc(Nmr) Structure of Protein RPA1320 From Rhodopseudomonas Palustris. Northeast Structural Genomics Consortium Target RPT3; Ontario Center For Structural Proteomics Target RP1313.
Zinc Binding Sites:
The binding sites of Zinc atom in the Solution uc(Nmr) Structure of Protein RPA1320 From Rhodopseudomonas Palustris. Northeast Structural Genomics Consortium Target RPT3; Ontario Center For Structural Proteomics Target RP1313.
(pdb code 2ida). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Solution uc(Nmr) Structure of Protein RPA1320 From Rhodopseudomonas Palustris. Northeast Structural Genomics Consortium Target RPT3; Ontario Center For Structural Proteomics Target RP1313., PDB code: 2ida:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 2ida
Go back to
Zinc Binding Sites List in 2ida
Zinc binding site 1 out
of 2 in the Solution uc(Nmr) Structure of Protein RPA1320 From Rhodopseudomonas Palustris. Northeast Structural Genomics Consortium Target RPT3; Ontario Center For Structural Proteomics Target RP1313.
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Solution uc(Nmr) Structure of Protein RPA1320 From Rhodopseudomonas Palustris. Northeast Structural Genomics Consortium Target RPT3; Ontario Center For Structural Proteomics Target RP1313. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn103
b:0.0
occ:1.00
|
OD1
|
A:ASP81
|
1.9
|
0.0
|
1.0
|
ND1
|
A:HIS7
|
2.1
|
0.0
|
1.0
|
SG
|
A:CYS5
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS78
|
2.4
|
0.0
|
1.0
|
CG
|
A:ASP81
|
2.6
|
0.0
|
1.0
|
HB2
|
A:HIS7
|
2.8
|
0.0
|
1.0
|
OD2
|
A:ASP81
|
3.0
|
0.0
|
1.0
|
CE1
|
A:HIS7
|
3.1
|
0.0
|
1.0
|
CG
|
A:HIS7
|
3.1
|
0.0
|
1.0
|
HG23
|
A:VAL80
|
3.2
|
0.0
|
1.0
|
HE1
|
A:HIS7
|
3.3
|
0.0
|
1.0
|
CB
|
A:HIS7
|
3.4
|
0.0
|
1.0
|
HB2
|
A:CYS5
|
3.5
|
0.0
|
1.0
|
HB3
|
A:CYS78
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS5
|
3.6
|
0.0
|
1.0
|
CB
|
A:CYS78
|
3.6
|
0.0
|
1.0
|
HB2
|
A:ASP81
|
3.6
|
0.0
|
1.0
|
CB
|
A:ASP81
|
3.7
|
0.0
|
1.0
|
HB2
|
A:CYS78
|
3.8
|
0.0
|
1.0
|
HB3
|
A:CYS5
|
3.9
|
0.0
|
1.0
|
H
|
A:HIS7
|
3.9
|
0.0
|
1.0
|
HG21
|
A:VAL80
|
3.9
|
0.0
|
1.0
|
CG2
|
A:VAL80
|
3.9
|
0.0
|
1.0
|
HB3
|
A:HIS7
|
4.0
|
0.0
|
1.0
|
HG22
|
A:VAL80
|
4.1
|
0.0
|
1.0
|
HD11
|
A:ILE65
|
4.2
|
0.0
|
1.0
|
NE2
|
A:HIS7
|
4.2
|
0.0
|
1.0
|
CD2
|
A:HIS7
|
4.2
|
0.0
|
1.0
|
H
|
A:ASP81
|
4.3
|
0.0
|
1.0
|
HB3
|
A:ASP81
|
4.4
|
0.0
|
1.0
|
N
|
A:ASP81
|
4.6
|
0.0
|
1.0
|
HB2
|
A:PRO64
|
4.6
|
0.0
|
1.0
|
HD2
|
A:ARG6
|
4.6
|
0.0
|
1.0
|
HH11
|
A:ARG6
|
4.6
|
0.0
|
1.0
|
N
|
A:HIS7
|
4.6
|
0.0
|
1.0
|
CA
|
A:HIS7
|
4.7
|
0.0
|
1.0
|
HG13
|
A:ILE65
|
4.7
|
0.0
|
1.0
|
HG12
|
A:ILE65
|
4.7
|
0.0
|
1.0
|
HG22
|
A:VAL83
|
4.7
|
0.0
|
1.0
|
CA
|
A:ASP81
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS5
|
4.9
|
0.0
|
1.0
|
CA
|
A:CYS78
|
4.9
|
0.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 2ida
Go back to
Zinc Binding Sites List in 2ida
Zinc binding site 2 out
of 2 in the Solution uc(Nmr) Structure of Protein RPA1320 From Rhodopseudomonas Palustris. Northeast Structural Genomics Consortium Target RPT3; Ontario Center For Structural Proteomics Target RP1313.
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Solution uc(Nmr) Structure of Protein RPA1320 From Rhodopseudomonas Palustris. Northeast Structural Genomics Consortium Target RPT3; Ontario Center For Structural Proteomics Target RP1313. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn104
b:0.0
occ:1.00
|
NE2
|
A:HIS57
|
2.1
|
0.0
|
1.0
|
ND1
|
A:HIS63
|
2.1
|
0.0
|
1.0
|
SG
|
A:CYS37
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS40
|
2.4
|
0.0
|
1.0
|
CE1
|
A:HIS57
|
3.1
|
0.0
|
1.0
|
HB2
|
A:HIS63
|
3.1
|
0.0
|
1.0
|
CE1
|
A:HIS63
|
3.1
|
0.0
|
1.0
|
CD2
|
A:HIS57
|
3.1
|
0.0
|
1.0
|
CG
|
A:HIS63
|
3.1
|
0.0
|
1.0
|
HE1
|
A:HIS63
|
3.3
|
0.0
|
1.0
|
HE1
|
A:HIS57
|
3.3
|
0.0
|
1.0
|
HD2
|
A:HIS57
|
3.3
|
0.0
|
1.0
|
HB2
|
A:CYS37
|
3.4
|
0.0
|
1.0
|
HB3
|
A:CYS40
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS37
|
3.5
|
0.0
|
1.0
|
CB
|
A:HIS63
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS40
|
3.6
|
0.0
|
1.0
|
HB3
|
A:HIS63
|
3.6
|
0.0
|
1.0
|
H
|
A:CYS40
|
3.7
|
0.0
|
1.0
|
HB3
|
A:HIS42
|
3.8
|
0.0
|
1.0
|
HB3
|
A:CYS37
|
3.8
|
0.0
|
1.0
|
OG1
|
A:THR61
|
3.8
|
0.0
|
1.0
|
HG23
|
A:THR61
|
4.0
|
0.0
|
1.0
|
H
|
A:HIS42
|
4.1
|
0.0
|
1.0
|
ND1
|
A:HIS57
|
4.2
|
0.0
|
1.0
|
NE2
|
A:HIS63
|
4.2
|
0.0
|
1.0
|
CG
|
A:HIS57
|
4.2
|
0.0
|
1.0
|
CD2
|
A:HIS63
|
4.3
|
0.0
|
1.0
|
HG1
|
A:THR61
|
4.3
|
0.0
|
1.0
|
HB2
|
A:CYS40
|
4.3
|
0.0
|
1.0
|
HB
|
A:THR61
|
4.3
|
0.0
|
1.0
|
HB2
|
A:HIS42
|
4.4
|
0.0
|
1.0
|
HB
|
A:THR39
|
4.4
|
0.0
|
1.0
|
N
|
A:CYS40
|
4.5
|
0.0
|
1.0
|
CB
|
A:THR61
|
4.5
|
0.0
|
1.0
|
CB
|
A:HIS42
|
4.6
|
0.0
|
1.0
|
CA
|
A:CYS40
|
4.6
|
0.0
|
1.0
|
H
|
A:CYS37
|
4.7
|
0.0
|
1.0
|
CG2
|
A:THR61
|
4.8
|
0.0
|
1.0
|
H
|
A:GLY41
|
4.8
|
0.0
|
1.0
|
CA
|
A:CYS37
|
4.9
|
0.0
|
1.0
|
O
|
A:HIS42
|
4.9
|
0.0
|
1.0
|
N
|
A:HIS42
|
4.9
|
0.0
|
1.0
|
CA
|
A:HIS63
|
5.0
|
0.0
|
1.0
|
|
Reference:
A.Lemak,
A.Yee,
J.A.Lukin,
M.Karra,
A.Gutmanas,
C.H.Arrowsmith.
Solution Structure of RPA1320 To Be Published.
Page generated: Thu Oct 17 00:53:25 2024
|