Atomistry » Zinc » PDB 2hpy-2i7v » 2i0m
Atomistry »
  Zinc »
    PDB 2hpy-2i7v »
      2i0m »

Zinc in PDB 2i0m: Crystal Structure of the Phosphate Transport System Regulatory Protein Phou From Streptococcus Pneumoniae

Protein crystallography data

The structure of Crystal Structure of the Phosphate Transport System Regulatory Protein Phou From Streptococcus Pneumoniae, PDB code: 2i0m was solved by R.Zhang, H.Li, J.Abdullah, A.Joachimiak, Midwest Center For Structuralgenomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.72 / 2.40
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 72.547, 88.965, 75.790, 90.00, 90.00, 90.00
R / Rfree (%) 23.5 / 28.6

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of the Phosphate Transport System Regulatory Protein Phou From Streptococcus Pneumoniae (pdb code 2i0m). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 3 binding sites of Zinc where determined in the Crystal Structure of the Phosphate Transport System Regulatory Protein Phou From Streptococcus Pneumoniae, PDB code: 2i0m:
Jump to Zinc binding site number: 1; 2; 3;

Zinc binding site 1 out of 3 in 2i0m

Go back to Zinc Binding Sites List in 2i0m
Zinc binding site 1 out of 3 in the Crystal Structure of the Phosphate Transport System Regulatory Protein Phou From Streptococcus Pneumoniae


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Phosphate Transport System Regulatory Protein Phou From Streptococcus Pneumoniae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn217

b:57.9
occ:1.00
OE2 A:GLU191 2.0 44.0 1.0
OD2 A:ASP156 2.2 45.6 1.0
OD1 A:ASP195 2.5 56.6 1.0
OD2 A:ASP152 2.7 50.8 1.0
CD A:GLU191 3.1 43.6 1.0
CG A:ASP156 3.1 46.3 1.0
CG A:ASP195 3.1 50.9 1.0
OD1 A:ASP152 3.2 46.8 1.0
CG A:ASP152 3.3 49.2 1.0
OD2 A:ASP195 3.3 57.1 1.0
OD1 A:ASP156 3.3 47.2 1.0
CG A:GLU191 3.7 43.1 1.0
O A:GLU191 3.9 43.3 1.0
OE1 A:GLU191 4.0 43.5 1.0
CB A:ASP195 4.4 46.3 1.0
O A:ASP152 4.4 49.5 1.0
CB A:ASP156 4.5 45.3 1.0
N A:ASP195 4.7 45.1 1.0
C A:GLU191 4.7 42.8 1.0
CA A:ASP195 4.7 44.9 1.0
CB A:ASP152 4.7 49.5 1.0
N A:ASP156 4.7 45.6 1.0
CA A:ASP156 4.8 45.3 1.0
CG2 A:ILE155 4.8 45.5 1.0
CB A:GLU191 4.9 42.1 1.0
CA A:GLU191 5.0 42.0 1.0

Zinc binding site 2 out of 3 in 2i0m

Go back to Zinc Binding Sites List in 2i0m
Zinc binding site 2 out of 3 in the Crystal Structure of the Phosphate Transport System Regulatory Protein Phou From Streptococcus Pneumoniae


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of the Phosphate Transport System Regulatory Protein Phou From Streptococcus Pneumoniae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn218

b:52.9
occ:1.00
NE2 A:HIS10 2.2 43.3 1.0
CD2 A:HIS10 3.1 40.7 1.0
CE1 A:HIS10 3.2 41.4 1.0
ND1 A:HIS10 4.3 43.6 1.0
CG A:HIS10 4.3 43.8 1.0
CG A:GLN14 4.4 41.3 1.0
CD A:GLN14 5.0 40.1 1.0

Zinc binding site 3 out of 3 in 2i0m

Go back to Zinc Binding Sites List in 2i0m
Zinc binding site 3 out of 3 in the Crystal Structure of the Phosphate Transport System Regulatory Protein Phou From Streptococcus Pneumoniae


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Crystal Structure of the Phosphate Transport System Regulatory Protein Phou From Streptococcus Pneumoniae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn219

b:46.5
occ:1.00
OD2 A:ASP95 2.0 40.3 1.0
OE2 A:GLU91 2.3 40.7 1.0
OE1 A:GLU91 2.6 41.4 1.0
CD A:GLU91 2.8 43.0 1.0
CG A:ASP95 3.0 38.8 1.0
OD1 A:ASP95 3.3 33.6 1.0
CG A:GLU91 4.2 42.6 1.0
O A:GLU91 4.3 42.9 1.0
CB A:ASP95 4.3 38.6 1.0
OD1 A:ASN53 4.7 45.8 1.0
CG A:ARG92 4.7 43.6 1.0
ND2 A:ASN53 4.7 38.2 1.0
C A:GLU91 4.8 43.1 1.0
CA A:ARG92 5.0 42.1 1.0

Reference:

R.Zhang, H.Li, J.Abdullah, A.Joachimiak. Crystal Structure of the Phosphate Transport System Regulatory Protein Phou From Streptococcus Pneumoniae To Be Published 2006.
Page generated: Thu Oct 17 00:45:18 2024

Last articles

Zn in 9FD2
Zn in 9GUW
Zn in 9GUX
Zn in 9F7C
Zn in 9GUR
Zn in 9F7A
Zn in 9DDE
Zn in 9DBY
Zn in 9EBZ
Zn in 9DGG
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy