Zinc in PDB 2h4l: Complex of Pmm/Pgm with Ribose 1-Phosphate

All present enzymatic activity of Complex of Pmm/Pgm with Ribose 1-Phosphate:
5.4.2.2; 5.4.2.8;

The structure of Complex of Pmm/Pgm with Ribose 1-Phosphate, PDB code: 2h4l was solved by L.J.Beamer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	43.85 / 2.40
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	70.717, 74.095, 84.347, 90.00, 90.00, 90.00
R / Rfree (%)	18.6 / 25.9

The binding sites of Zinc atom in the Complex of Pmm/Pgm with Ribose 1-Phosphate (pdb code 2h4l). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Complex of Pmm/Pgm with Ribose 1-Phosphate, PDB code: 2h4l:

Zinc binding site 1 out of 1 in the Complex of Pmm/Pgm with Ribose 1-Phosphate


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Complex of Pmm/Pgm with Ribose 1-Phosphate within 5.0Å range: probe atom residue distance (Å) B Occ X:Zn500 b:33.3 occ:1.00 OD2 X:ASP242 1.8 18.2 1.0 OD1 X:ASP246 1.9 18.5 1.0 OD1 X:ASP244 2.1 19.1 1.0 OG X:SEP108 2.5 31.2 1.0 O3P X:SEP108 2.8 30.9 1.0 CG X:ASP242 2.9 18.4 1.0 CG X:ASP246 3.0 18.3 1.0 CG X:ASP244 3.1 18.4 1.0 P X:SEP108 3.1 30.4 1.0 OD1 X:ASP242 3.3 20.5 1.0 OD2 X:ASP246 3.3 16.9 1.0 OD2 X:ASP244 3.4 17.4 1.0 CB X:SEP108 3.7 29.1 1.0 NZ X:LYS118 3.8 22.0 1.0 CG X:ARG247 3.9 24.5 1.0 CA X:SEP108 4.0 28.8 1.0 O2P X:SEP108 4.1 32.6 1.0 NH1 X:ARG247 4.1 38.4 1.0 CB X:ASP242 4.1 18.1 1.0 N X:ASP246 4.3 18.2 1.0 C X:SEP108 4.3 28.9 1.0 CB X:ASP246 4.3 17.8 1.0 O1P X:SEP108 4.4 30.9 1.0 N X:ASP244 4.5 18.3 1.0 N X:ARG247 4.5 19.9 1.0 CB X:ASP244 4.5 18.0 1.0 N X:HIS109 4.5 29.7 1.0 CE1 X:HIS329 4.5 16.7 1.0 CA X:ASP246 4.6 18.4 1.0 NE2 X:HIS329 4.7 17.8 1.0 CB X:ARG247 4.7 21.0 1.0 C X:ASP246 4.7 19.0 1.0 CD X:ARG247 4.7 29.8 1.0 N X:GLY245 4.8 17.8 1.0 O X:SEP108 4.8 29.0 1.0 CA X:ASP244 4.8 18.1 1.0 CZ X:ARG247 4.8 37.7 1.0

C.Regni, G.S.Shackelford, L.J.Beamer. Complexes of the Enzyme Phosphomannomutase/Phosphoglucomutase with A Slow Substrate and An Inhibitor. Acta Crystallogr.,Sect.F V. 62 722 2006.
ISSN: ESSN 1744-3091
PubMed: 16880541
DOI: 10.1107/S1744309106025887