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Zinc in PDB 2gqj: Solution Structure of the Two Zf-C2H2 Like Domains(493-575) of Human Zinc Finger Protein KIAA1196

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the Two Zf-C2H2 Like Domains(493-575) of Human Zinc Finger Protein KIAA1196 (pdb code 2gqj). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Two Zf-C2H2 Like Domains(493-575) of Human Zinc Finger Protein KIAA1196, PDB code: 2gqj:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2gqj

Go back to Zinc Binding Sites List in 2gqj
Zinc binding site 1 out of 2 in the Solution Structure of the Two Zf-C2H2 Like Domains(493-575) of Human Zinc Finger Protein KIAA1196


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Two Zf-C2H2 Like Domains(493-575) of Human Zinc Finger Protein KIAA1196 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn200

b:0.0
occ:1.00
NE2 A:HIS44 2.0 0.0 1.0
SG A:CYS27 2.3 0.0 1.0
SG A:CYS30 2.3 0.0 1.0
SG A:CYS48 2.3 0.0 1.0
HB2 A:CYS48 2.7 0.0 1.0
CD2 A:HIS44 2.9 0.0 1.0
HD2 A:HIS44 3.0 0.0 1.0
CB A:CYS48 3.1 0.0 1.0
CE1 A:HIS44 3.1 0.0 1.0
HB A:THR29 3.2 0.0 1.0
H A:CYS30 3.2 0.0 1.0
HB3 A:CYS27 3.3 0.0 1.0
CB A:CYS27 3.3 0.0 1.0
HB2 A:CYS27 3.4 0.0 1.0
HE1 A:HIS44 3.5 0.0 1.0
HB3 A:CYS48 3.7 0.0 1.0
HA A:MET45 3.8 0.0 1.0
CB A:CYS30 4.0 0.0 1.0
HG21 A:VAL32 4.1 0.0 1.0
CG A:HIS44 4.1 0.0 1.0
N A:CYS30 4.1 0.0 1.0
ND1 A:HIS44 4.2 0.0 1.0
HA A:CYS48 4.2 0.0 1.0
CB A:THR29 4.2 0.0 1.0
HG12 A:VAL33 4.3 0.0 1.0
CA A:CYS48 4.3 0.0 1.0
H A:ASN31 4.3 0.0 1.0
HB3 A:CYS30 4.3 0.0 1.0
H A:VAL32 4.5 0.0 1.0
HG23 A:THR29 4.5 0.0 1.0
H A:THR29 4.5 0.0 1.0
HG1 A:THR29 4.5 0.0 1.0
CA A:CYS30 4.7 0.0 1.0
O A:VAL32 4.7 0.0 1.0
HB2 A:CYS30 4.7 0.0 1.0
CA A:CYS27 4.7 0.0 1.0
CG2 A:THR29 4.8 0.0 1.0
CA A:MET45 4.8 0.0 1.0
HG22 A:THR29 4.8 0.0 1.0
OG1 A:THR29 4.9 0.0 1.0

Zinc binding site 2 out of 2 in 2gqj

Go back to Zinc Binding Sites List in 2gqj
Zinc binding site 2 out of 2 in the Solution Structure of the Two Zf-C2H2 Like Domains(493-575) of Human Zinc Finger Protein KIAA1196


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Two Zf-C2H2 Like Domains(493-575) of Human Zinc Finger Protein KIAA1196 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn300

b:0.0
occ:1.00
NE2 A:HIS78 2.0 0.0 1.0
NE2 A:HIS73 2.0 0.0 1.0
SG A:CYS57 2.3 0.0 1.0
SG A:CYS60 2.3 0.0 1.0
CD2 A:HIS78 2.7 0.0 1.0
HD2 A:HIS78 2.7 0.0 1.0
CE1 A:HIS73 2.8 0.0 1.0
HE1 A:HIS73 2.9 0.0 1.0
HB3 A:CYS60 3.0 0.0 1.0
HB3 A:CYS57 3.0 0.0 1.0
CB A:CYS57 3.1 0.0 1.0
HB2 A:CYS57 3.1 0.0 1.0
H A:CYS60 3.2 0.0 1.0
CD2 A:HIS73 3.2 0.0 1.0
CE1 A:HIS78 3.2 0.0 1.0
CB A:CYS60 3.3 0.0 1.0
HD2 A:HIS73 3.6 0.0 1.0
HE1 A:HIS78 3.7 0.0 1.0
HB2 A:HIS59 3.8 0.0 1.0
N A:CYS60 3.8 0.0 1.0
CG A:HIS78 3.9 0.0 1.0
ND1 A:HIS73 4.0 0.0 1.0
HB2 A:CYS60 4.1 0.0 1.0
HA A:THR74 4.1 0.0 1.0
ND1 A:HIS78 4.1 0.0 1.0
HE1 A:PHE64 4.1 0.0 1.0
CA A:CYS60 4.1 0.0 1.0
H A:ARG61 4.1 0.0 1.0
CG A:HIS73 4.2 0.0 1.0
HB2 A:LYS62 4.4 0.0 1.0
HD2 A:LYS62 4.4 0.0 1.0
H A:HIS59 4.4 0.0 1.0
H A:GLN58 4.4 0.0 1.0
H A:LYS62 4.4 0.0 1.0
CA A:CYS57 4.6 0.0 1.0
HB2 A:GLU77 4.6 0.0 1.0
HZ A:PHE64 4.7 0.0 1.0
HD11 A:LEU70 4.7 0.0 1.0
CB A:HIS59 4.8 0.0 1.0
N A:ARG61 4.8 0.0 1.0
C A:HIS59 4.8 0.0 1.0
HA A:CYS57 4.9 0.0 1.0
HD1 A:HIS73 4.9 0.0 1.0
N A:HIS59 4.9 0.0 1.0
C A:CYS60 4.9 0.0 1.0
CE1 A:PHE64 4.9 0.0 1.0
HA A:CYS60 5.0 0.0 1.0

Reference:

C.Kurosaki, F.Hayashi, M.Yoshida, S.Yokoyama. Solution Structure of the Two Zf-C2H2 Like Domains(493-575) of Human Zinc Finger Protein KIAA1196 To Be Published.
Page generated: Wed Dec 16 03:29:38 2020

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