Zinc in PDB 2gqj: Solution Structure of the Two Zf-C2H2 Like Domains(493-575) of Human Zinc Finger Protein KIAA1196
Zinc Binding Sites:
The binding sites of Zinc atom in the Solution Structure of the Two Zf-C2H2 Like Domains(493-575) of Human Zinc Finger Protein KIAA1196
(pdb code 2gqj). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Solution Structure of the Two Zf-C2H2 Like Domains(493-575) of Human Zinc Finger Protein KIAA1196, PDB code: 2gqj:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 2gqj
Go back to
Zinc Binding Sites List in 2gqj
Zinc binding site 1 out
of 2 in the Solution Structure of the Two Zf-C2H2 Like Domains(493-575) of Human Zinc Finger Protein KIAA1196
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Solution Structure of the Two Zf-C2H2 Like Domains(493-575) of Human Zinc Finger Protein KIAA1196 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn200
b:0.0
occ:1.00
|
NE2
|
A:HIS44
|
2.0
|
0.0
|
1.0
|
SG
|
A:CYS27
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS30
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS48
|
2.3
|
0.0
|
1.0
|
HB2
|
A:CYS48
|
2.7
|
0.0
|
1.0
|
CD2
|
A:HIS44
|
2.9
|
0.0
|
1.0
|
HD2
|
A:HIS44
|
3.0
|
0.0
|
1.0
|
CB
|
A:CYS48
|
3.1
|
0.0
|
1.0
|
CE1
|
A:HIS44
|
3.1
|
0.0
|
1.0
|
HB
|
A:THR29
|
3.2
|
0.0
|
1.0
|
H
|
A:CYS30
|
3.2
|
0.0
|
1.0
|
HB3
|
A:CYS27
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS27
|
3.3
|
0.0
|
1.0
|
HB2
|
A:CYS27
|
3.4
|
0.0
|
1.0
|
HE1
|
A:HIS44
|
3.5
|
0.0
|
1.0
|
HB3
|
A:CYS48
|
3.7
|
0.0
|
1.0
|
HA
|
A:MET45
|
3.8
|
0.0
|
1.0
|
CB
|
A:CYS30
|
4.0
|
0.0
|
1.0
|
HG21
|
A:VAL32
|
4.1
|
0.0
|
1.0
|
CG
|
A:HIS44
|
4.1
|
0.0
|
1.0
|
N
|
A:CYS30
|
4.1
|
0.0
|
1.0
|
ND1
|
A:HIS44
|
4.2
|
0.0
|
1.0
|
HA
|
A:CYS48
|
4.2
|
0.0
|
1.0
|
CB
|
A:THR29
|
4.2
|
0.0
|
1.0
|
HG12
|
A:VAL33
|
4.3
|
0.0
|
1.0
|
CA
|
A:CYS48
|
4.3
|
0.0
|
1.0
|
H
|
A:ASN31
|
4.3
|
0.0
|
1.0
|
HB3
|
A:CYS30
|
4.3
|
0.0
|
1.0
|
H
|
A:VAL32
|
4.5
|
0.0
|
1.0
|
HG23
|
A:THR29
|
4.5
|
0.0
|
1.0
|
H
|
A:THR29
|
4.5
|
0.0
|
1.0
|
HG1
|
A:THR29
|
4.5
|
0.0
|
1.0
|
CA
|
A:CYS30
|
4.7
|
0.0
|
1.0
|
O
|
A:VAL32
|
4.7
|
0.0
|
1.0
|
HB2
|
A:CYS30
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS27
|
4.7
|
0.0
|
1.0
|
CG2
|
A:THR29
|
4.8
|
0.0
|
1.0
|
CA
|
A:MET45
|
4.8
|
0.0
|
1.0
|
HG22
|
A:THR29
|
4.8
|
0.0
|
1.0
|
OG1
|
A:THR29
|
4.9
|
0.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 2gqj
Go back to
Zinc Binding Sites List in 2gqj
Zinc binding site 2 out
of 2 in the Solution Structure of the Two Zf-C2H2 Like Domains(493-575) of Human Zinc Finger Protein KIAA1196
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Solution Structure of the Two Zf-C2H2 Like Domains(493-575) of Human Zinc Finger Protein KIAA1196 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn300
b:0.0
occ:1.00
|
NE2
|
A:HIS78
|
2.0
|
0.0
|
1.0
|
NE2
|
A:HIS73
|
2.0
|
0.0
|
1.0
|
SG
|
A:CYS57
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS60
|
2.3
|
0.0
|
1.0
|
CD2
|
A:HIS78
|
2.7
|
0.0
|
1.0
|
HD2
|
A:HIS78
|
2.7
|
0.0
|
1.0
|
CE1
|
A:HIS73
|
2.8
|
0.0
|
1.0
|
HE1
|
A:HIS73
|
2.9
|
0.0
|
1.0
|
HB3
|
A:CYS60
|
3.0
|
0.0
|
1.0
|
HB3
|
A:CYS57
|
3.0
|
0.0
|
1.0
|
CB
|
A:CYS57
|
3.1
|
0.0
|
1.0
|
HB2
|
A:CYS57
|
3.1
|
0.0
|
1.0
|
H
|
A:CYS60
|
3.2
|
0.0
|
1.0
|
CD2
|
A:HIS73
|
3.2
|
0.0
|
1.0
|
CE1
|
A:HIS78
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS60
|
3.3
|
0.0
|
1.0
|
HD2
|
A:HIS73
|
3.6
|
0.0
|
1.0
|
HE1
|
A:HIS78
|
3.7
|
0.0
|
1.0
|
HB2
|
A:HIS59
|
3.8
|
0.0
|
1.0
|
N
|
A:CYS60
|
3.8
|
0.0
|
1.0
|
CG
|
A:HIS78
|
3.9
|
0.0
|
1.0
|
ND1
|
A:HIS73
|
4.0
|
0.0
|
1.0
|
HB2
|
A:CYS60
|
4.1
|
0.0
|
1.0
|
HA
|
A:THR74
|
4.1
|
0.0
|
1.0
|
ND1
|
A:HIS78
|
4.1
|
0.0
|
1.0
|
HE1
|
A:PHE64
|
4.1
|
0.0
|
1.0
|
CA
|
A:CYS60
|
4.1
|
0.0
|
1.0
|
H
|
A:ARG61
|
4.1
|
0.0
|
1.0
|
CG
|
A:HIS73
|
4.2
|
0.0
|
1.0
|
HB2
|
A:LYS62
|
4.4
|
0.0
|
1.0
|
HD2
|
A:LYS62
|
4.4
|
0.0
|
1.0
|
H
|
A:HIS59
|
4.4
|
0.0
|
1.0
|
H
|
A:GLN58
|
4.4
|
0.0
|
1.0
|
H
|
A:LYS62
|
4.4
|
0.0
|
1.0
|
CA
|
A:CYS57
|
4.6
|
0.0
|
1.0
|
HB2
|
A:GLU77
|
4.6
|
0.0
|
1.0
|
HZ
|
A:PHE64
|
4.7
|
0.0
|
1.0
|
HD11
|
A:LEU70
|
4.7
|
0.0
|
1.0
|
CB
|
A:HIS59
|
4.8
|
0.0
|
1.0
|
N
|
A:ARG61
|
4.8
|
0.0
|
1.0
|
C
|
A:HIS59
|
4.8
|
0.0
|
1.0
|
HA
|
A:CYS57
|
4.9
|
0.0
|
1.0
|
HD1
|
A:HIS73
|
4.9
|
0.0
|
1.0
|
N
|
A:HIS59
|
4.9
|
0.0
|
1.0
|
C
|
A:CYS60
|
4.9
|
0.0
|
1.0
|
CE1
|
A:PHE64
|
4.9
|
0.0
|
1.0
|
HA
|
A:CYS60
|
5.0
|
0.0
|
1.0
|
|
Reference:
C.Kurosaki,
F.Hayashi,
M.Yoshida,
S.Yokoyama.
Solution Structure of the Two Zf-C2H2 Like Domains(493-575) of Human Zinc Finger Protein KIAA1196 To Be Published.
Page generated: Thu Oct 17 00:22:38 2024
|