Atomistry » Zinc » PDB 2fnn-2g0d » 2fpx
Atomistry »
  Zinc »
    PDB 2fnn-2g0d »
      2fpx »

Zinc in PDB 2fpx: Crystal Structure of the N-Terminal Domain of E.Coli Hisb- Sulfate Complex.

Enzymatic activity of Crystal Structure of the N-Terminal Domain of E.Coli Hisb- Sulfate Complex.

All present enzymatic activity of Crystal Structure of the N-Terminal Domain of E.Coli Hisb- Sulfate Complex.:
3.1.3.15;

Protein crystallography data

The structure of Crystal Structure of the N-Terminal Domain of E.Coli Hisb- Sulfate Complex., PDB code: 2fpx was solved by E.S.Rangarajan, M.Cygler, A.Matte, Montreal-Kingston Bacterialstructural Genomics Initiative (Bsgi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.80
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 53.605, 132.778, 107.162, 90.00, 90.00, 90.00
R / Rfree (%) 17.8 / 21.3

Other elements in 2fpx:

The structure of Crystal Structure of the N-Terminal Domain of E.Coli Hisb- Sulfate Complex. also contains other interesting chemical elements:

Magnesium (Mg) 3 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of the N-Terminal Domain of E.Coli Hisb- Sulfate Complex. (pdb code 2fpx). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of the N-Terminal Domain of E.Coli Hisb- Sulfate Complex., PDB code: 2fpx:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2fpx

Go back to Zinc Binding Sites List in 2fpx
Zinc binding site 1 out of 2 in the Crystal Structure of the N-Terminal Domain of E.Coli Hisb- Sulfate Complex.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the N-Terminal Domain of E.Coli Hisb- Sulfate Complex. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn602

b:23.5
occ:1.00
ND1 A:HIS96 2.1 23.2 1.0
SG A:CYS104 2.2 24.9 1.0
SG A:CYS94 2.3 19.5 1.0
SG A:CYS102 2.4 27.0 1.0
CE1 A:HIS96 3.0 24.2 1.0
CG A:HIS96 3.2 22.2 1.0
CB A:CYS102 3.3 28.9 1.0
CB A:CYS94 3.5 19.7 1.0
CB A:CYS104 3.5 25.1 1.0
CB A:HIS96 3.6 22.0 1.0
N A:ARG105 3.6 23.8 1.0
C A:CYS104 3.8 24.6 1.0
N A:CYS104 3.8 26.2 1.0
CA A:CYS104 3.8 25.2 1.0
CA A:CYS94 4.1 19.5 1.0
NE2 A:HIS96 4.1 23.7 1.0
N A:HIS96 4.2 21.3 1.0
CD2 A:HIS96 4.2 23.7 1.0
CA A:ARG105 4.3 23.2 1.0
CD A:PRO95 4.3 19.5 1.0
CB A:ARG105 4.4 23.3 1.0
O A:CYS104 4.4 24.6 1.0
CA A:HIS96 4.5 22.0 1.0
C A:CYS94 4.5 19.6 1.0
N A:PRO95 4.5 19.6 1.0
O A:HOH650 4.6 25.0 1.0
CA A:CYS102 4.7 28.8 1.0
N A:ASP103 4.8 28.4 1.0
C A:CYS102 4.9 28.6 1.0

Zinc binding site 2 out of 2 in 2fpx

Go back to Zinc Binding Sites List in 2fpx
Zinc binding site 2 out of 2 in the Crystal Structure of the N-Terminal Domain of E.Coli Hisb- Sulfate Complex.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of the N-Terminal Domain of E.Coli Hisb- Sulfate Complex. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn601

b:11.9
occ:1.00
ND1 B:HIS96 2.1 10.2 1.0
SG B:CYS104 2.3 11.3 1.0
SG B:CYS94 2.3 9.1 1.0
SG B:CYS102 2.4 11.0 1.0
CE1 B:HIS96 3.1 11.0 1.0
CG B:HIS96 3.1 9.6 1.0
CB B:CYS102 3.3 10.9 1.0
CB B:CYS94 3.4 8.9 1.0
CB B:HIS96 3.4 10.0 1.0
CB B:CYS104 3.5 10.5 1.0
N B:ARG105 3.5 10.5 1.0
C B:CYS104 3.7 10.5 1.0
CA B:CYS104 3.8 10.3 1.0
N B:CYS104 3.8 10.2 1.0
CA B:CYS94 4.1 8.7 1.0
N B:HIS96 4.2 10.3 1.0
CA B:ARG105 4.2 10.3 1.0
NE2 B:HIS96 4.2 10.7 1.0
CD B:PRO95 4.2 9.3 1.0
CD2 B:HIS96 4.3 10.8 1.0
CB B:ARG105 4.3 10.6 1.0
O B:CYS104 4.4 10.2 1.0
CA B:HIS96 4.5 10.3 1.0
O B:HOH637 4.5 19.6 1.0
C B:CYS94 4.5 8.7 1.0
N B:PRO95 4.6 9.2 1.0
CA B:CYS102 4.6 10.6 1.0
C B:CYS102 4.8 10.8 1.0
N B:ASP103 4.9 10.4 1.0
O B:HOH850 5.0 31.1 1.0

Reference:

E.S.Rangarajan, A.Proteau, J.Wagner, M.N.Hung, A.Matte, M.Cygler. Structural Snapshots of Escherichia Coli Histidinol Phosphate Phosphatase Along the Reaction Pathway. J.Biol.Chem. V. 281 37930 2006.
ISSN: ISSN 0021-9258
PubMed: 16966333
DOI: 10.1074/JBC.M604916200
Page generated: Wed Oct 16 23:51:54 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy