Zinc in PDB 2fk4: Solution Structure of the C-Terminal Zinc Binding Domain of the HPV16 E6 Oncoprotein

The binding sites of Zinc atom in the Solution Structure of the C-Terminal Zinc Binding Domain of the HPV16 E6 Oncoprotein (pdb code 2fk4). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Solution Structure of the C-Terminal Zinc Binding Domain of the HPV16 E6 Oncoprotein, PDB code: 2fk4:

Zinc binding site 1 out of 1 in the Solution Structure of the C-Terminal Zinc Binding Domain of the HPV16 E6 Oncoprotein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the C-Terminal Zinc Binding Domain of the HPV16 E6 Oncoprotein within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn101 b:1.0 occ:1.00 SG A:CYS29 2.3 1.2 1.0 SG A:CYS59 2.3 1.8 1.0 SG A:CYS62 2.3 1.8 1.0 SG A:CYS26 2.3 1.9 1.0 HA A:CYS59 2.5 1.7 1.0 H A:CYS29 2.9 1.4 1.0 HB3 A:CYS26 3.1 1.7 1.0 HB2 A:CYS29 3.1 1.5 1.0 CB A:CYS59 3.2 1.8 1.0 HD22 A:ASN28 3.3 1.9 1.0 HB2 A:CYS62 3.3 2.0 1.0 CB A:CYS29 3.3 1.4 1.0 CA A:CYS59 3.3 1.3 1.0 CB A:CYS26 3.3 1.6 1.0 CB A:CYS62 3.3 1.9 1.0 HB2 A:CYS59 3.4 2.0 1.0 ND2 A:ASN28 3.5 1.5 1.0 HD21 A:ASN28 3.6 1.4 1.0 HB3 A:CYS62 3.6 2.1 1.0 N A:CYS29 3.7 1.4 1.0 H A:ASN28 3.8 1.3 1.0 HB2 A:CYS26 4.0 1.8 1.0 HB3 A:CYS29 4.1 1.8 1.0 CG A:ASN28 4.1 1.8 1.0 CA A:CYS29 4.2 1.4 1.0 HB3 A:CYS59 4.2 2.2 1.0 HG2 A:ARG58 4.2 3.9 1.0 HA A:CYS26 4.2 1.3 1.0 N A:CYS59 4.3 1.2 1.0 O A:CYS59 4.3 2.1 1.0 C A:CYS59 4.3 1.7 1.0 CA A:CYS26 4.4 1.4 1.0 OD1 A:ASN28 4.5 2.6 1.0 H A:CYS62 4.5 1.8 1.0 H A:ILE27 4.6 1.6 1.0 HG22 A:ILE27 4.7 2.2 1.0 H A:CYS59 4.7 1.6 1.0 H A:GLN30 4.7 1.6 1.0 CA A:CYS62 4.7 2.2 1.0 N A:ASN28 4.7 1.5 1.0 HA A:CYS29 4.8 1.5 1.0 C A:ASN28 4.8 1.5 1.0 C A:CYS26 4.9 1.6 1.0 O A:ARG58 4.9 1.8 1.0 N A:ILE27 5.0 1.4 1.0 C A:ARG58 5.0 1.6 1.0 HB3 A:ASN28 5.0 1.9 1.0

Y.Nomine, M.Masson, S.Charbonnier, K.Zanier, T.Ristriani, F.Deryckere, A.P.Sibler, D.Desplancq, R.A.Atkinson, E.Weiss, G.Orfanoudakis, B.Kieffer, G.Trave. Structural and Functional Analysis of E6 Oncoprotein: Insights in the Molecular Pathways of Human Papillomavirus-Mediated Pathogenesis Mol.Cell V. 21 665 2006.
ISSN: ISSN 1097-2765
PubMed: 16507364
DOI: 10.1016/J.MOLCEL.2006.01.024