Zinc in PDB 2f7q: Golgi Alpha-Mannosidase II Complex with Aminocyclopentitetrol

All present enzymatic activity of Golgi Alpha-Mannosidase II Complex with Aminocyclopentitetrol:
3.2.1.114;

The structure of Golgi Alpha-Mannosidase II Complex with Aminocyclopentitetrol, PDB code: 2f7q was solved by D.A.Kuntz, D.R.Rose, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.64 / 1.85
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	68.808, 109.665, 137.670, 90.00, 90.00, 90.00
R / Rfree (%)	15 / 19

The binding sites of Zinc atom in the Golgi Alpha-Mannosidase II Complex with Aminocyclopentitetrol (pdb code 2f7q). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Golgi Alpha-Mannosidase II Complex with Aminocyclopentitetrol, PDB code: 2f7q:

Zinc binding site 1 out of 1 in the Golgi Alpha-Mannosidase II Complex with Aminocyclopentitetrol


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Golgi Alpha-Mannosidase II Complex with Aminocyclopentitetrol within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn5001 b:15.1 occ:1.00 NE2 A:HIS90 2.1 10.1 1.0 OD2 A:ASP204 2.1 13.6 1.0 NE2 A:HIS471 2.1 13.0 1.0 O3 A:AOL5009 2.1 11.5 1.0 OD1 A:ASP92 2.2 15.9 1.0 O4 A:AOL5009 2.3 13.2 1.0 CD2 A:HIS90 3.0 11.3 1.0 CD2 A:HIS471 3.0 11.9 1.0 C4 A:AOL5009 3.1 14.5 1.0 CG A:ASP204 3.1 11.6 1.0 CG A:ASP92 3.1 13.3 1.0 CE1 A:HIS90 3.1 11.0 1.0 C3 A:AOL5009 3.2 13.4 1.0 CE1 A:HIS471 3.2 10.8 1.0 OD2 A:ASP92 3.4 16.3 1.0 CB A:ASP204 3.6 11.7 1.0 C5 A:AOL5009 4.0 15.9 1.0 OD2 A:ASP472 4.0 11.8 1.0 N5 A:AOL5009 4.1 17.1 1.0 O1 A:AOL5009 4.1 18.0 1.0 CG A:HIS90 4.2 10.0 1.0 ND1 A:HIS90 4.2 11.7 1.0 CG A:HIS471 4.2 11.6 1.0 OD1 A:ASP204 4.2 14.0 1.0 ND1 A:HIS471 4.2 11.4 1.0 C1 A:AOL5009 4.3 15.2 1.0 C2 A:AOL5009 4.4 15.8 1.0 CE1 A:HIS470 4.4 11.7 1.0 CB A:ASP92 4.5 12.6 1.0 O A:HOH5780 4.7 12.8 1.0 OH A:TYR269 4.7 15.5 1.0 O2 A:AOL5009 5.0 13.9 1.0

S.P.Kawatkar, D.A.Kuntz, D.R.Rose, G.J.Boons. Golgi Alpha-Mannosidase II Complex with Aminocyclopentitetrol To Be Published.