Atomistry » Zinc » PDB 2ewb-2f9v » 2exu
Atomistry »
  Zinc »
    PDB 2ewb-2f9v »
      2exu »

Zinc in PDB 2exu: Crystal Structure of Saccharomyces Cerevisiae Transcription Elongation Factors SPT4-SPT5NGN Domain

Protein crystallography data

The structure of Crystal Structure of Saccharomyces Cerevisiae Transcription Elongation Factors SPT4-SPT5NGN Domain, PDB code: 2exu was solved by F.Xu, M.Guo, P.Fang, M.Teng, L.Niu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 21.42 / 2.23
Space group P 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 53.801, 53.801, 177.120, 90.00, 90.00, 90.00
R / Rfree (%) 20.6 / 22.1

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Saccharomyces Cerevisiae Transcription Elongation Factors SPT4-SPT5NGN Domain (pdb code 2exu). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Saccharomyces Cerevisiae Transcription Elongation Factors SPT4-SPT5NGN Domain, PDB code: 2exu:

Zinc binding site 1 out of 1 in 2exu

Go back to Zinc Binding Sites List in 2exu
Zinc binding site 1 out of 1 in the Crystal Structure of Saccharomyces Cerevisiae Transcription Elongation Factors SPT4-SPT5NGN Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Saccharomyces Cerevisiae Transcription Elongation Factors SPT4-SPT5NGN Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn501

b:27.1
occ:1.00
SG A:CYS27 2.3 32.8 1.0
SG A:CYS7 2.3 35.2 1.0
SG A:CYS24 2.4 35.1 1.0
SG A:CYS10 2.4 36.1 1.0
CB A:CYS27 3.2 33.7 1.0
CB A:CYS7 3.2 35.0 1.0
CB A:CYS10 3.3 35.4 1.0
CB A:CYS24 3.5 35.8 1.0
N A:CYS10 3.7 35.2 1.0
N A:CYS27 3.9 34.2 1.0
CA A:CYS10 4.1 35.5 1.0
CA A:CYS27 4.2 33.8 1.0
CB A:ASN26 4.3 34.5 1.0
CZ A:PHE31 4.4 33.0 1.0
CG2 A:ILE12 4.5 35.1 1.0
CB A:LEU9 4.5 35.0 1.0
CE2 A:PHE31 4.5 32.4 1.0
CA A:CYS7 4.7 35.1 1.0
C A:LEU9 4.8 35.1 1.0
C A:ASN26 4.8 34.5 1.0
CA A:CYS24 4.9 35.7 1.0
CA A:ASN26 4.9 34.6 1.0
OD1 A:ASN26 4.9 35.8 1.0
C A:CYS10 4.9 35.5 1.0
N A:ASN26 4.9 34.6 1.0
N A:GLY11 5.0 35.4 1.0
CA A:LEU9 5.0 35.2 1.0
N A:LEU9 5.0 35.0 1.0

Reference:

F.Xu, M.Guo, P.Fang, M.Teng, L.Niu. Crystal Structure of Saccharomyces Cerevisiae Transcription Elongation Factors SPT4-SPT5NGN Domain To Be Published.
Page generated: Wed Oct 16 23:35:54 2024

Last articles

Zn in 9FD2
Zn in 9GUW
Zn in 9GUX
Zn in 9F7C
Zn in 9GUR
Zn in 9F7A
Zn in 9DDE
Zn in 9DBY
Zn in 9EBZ
Zn in 9DGG
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy