Zinc in PDB 2ep4: Solution Structure of Ring Finger From Human Ring Finger Protein 24
Zinc Binding Sites:
The binding sites of Zinc atom in the Solution Structure of Ring Finger From Human Ring Finger Protein 24
(pdb code 2ep4). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Solution Structure of Ring Finger From Human Ring Finger Protein 24, PDB code: 2ep4:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 2ep4
Go back to
Zinc Binding Sites List in 2ep4
Zinc binding site 1 out
of 2 in the Solution Structure of Ring Finger From Human Ring Finger Protein 24
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Solution Structure of Ring Finger From Human Ring Finger Protein 24 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn200
b:0.0
occ:1.00
|
ND1
|
A:HIS101
|
2.0
|
0.0
|
1.0
|
SG
|
A:CYS104
|
2.2
|
0.0
|
1.0
|
SG
|
A:CYS78
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS81
|
2.3
|
0.0
|
1.0
|
HB2
|
A:HIS101
|
2.8
|
0.0
|
1.0
|
H
|
A:CYS81
|
3.0
|
0.0
|
1.0
|
CE1
|
A:HIS101
|
3.0
|
0.0
|
1.0
|
CG
|
A:HIS101
|
3.1
|
0.0
|
1.0
|
HB3
|
A:CYS81
|
3.2
|
0.0
|
1.0
|
HB2
|
A:CYS78
|
3.2
|
0.0
|
1.0
|
HE1
|
A:HIS101
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS78
|
3.2
|
0.0
|
1.0
|
HB3
|
A:CYS78
|
3.3
|
0.0
|
1.0
|
HB2
|
A:CYS104
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS81
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS104
|
3.4
|
0.0
|
1.0
|
CB
|
A:HIS101
|
3.4
|
0.0
|
1.0
|
H
|
A:HIS101
|
3.5
|
0.0
|
1.0
|
HB
|
A:VAL80
|
3.7
|
0.0
|
1.0
|
HB3
|
A:CYS104
|
3.7
|
0.0
|
1.0
|
N
|
A:CYS81
|
3.8
|
0.0
|
1.0
|
H
|
A:LEU82
|
4.0
|
0.0
|
1.0
|
HB3
|
A:HIS101
|
4.1
|
0.0
|
1.0
|
NE2
|
A:HIS101
|
4.1
|
0.0
|
1.0
|
CD2
|
A:HIS101
|
4.2
|
0.0
|
1.0
|
CA
|
A:CYS81
|
4.2
|
0.0
|
1.0
|
HB2
|
A:CYS81
|
4.2
|
0.0
|
1.0
|
H
|
A:GLU83
|
4.3
|
0.0
|
1.0
|
N
|
A:HIS101
|
4.3
|
0.0
|
1.0
|
HB2
|
A:GLU83
|
4.5
|
0.0
|
1.0
|
CA
|
A:HIS101
|
4.5
|
0.0
|
1.0
|
H
|
A:CYS104
|
4.6
|
0.0
|
1.0
|
H
|
A:VAL80
|
4.6
|
0.0
|
1.0
|
N
|
A:LEU82
|
4.6
|
0.0
|
1.0
|
CA
|
A:CYS78
|
4.7
|
0.0
|
1.0
|
HE1
|
A:PHE85
|
4.7
|
0.0
|
1.0
|
CB
|
A:VAL80
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS104
|
4.8
|
0.0
|
1.0
|
H
|
A:ALA79
|
4.8
|
0.0
|
1.0
|
C
|
A:CYS81
|
4.8
|
0.0
|
1.0
|
HB3
|
A:PHE100
|
4.9
|
0.0
|
1.0
|
HA
|
A:CYS78
|
4.9
|
0.0
|
1.0
|
C
|
A:VAL80
|
5.0
|
0.0
|
1.0
|
HG3
|
A:LYS103
|
5.0
|
0.0
|
1.0
|
HE2
|
A:HIS101
|
5.0
|
0.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 2ep4
Go back to
Zinc Binding Sites List in 2ep4
Zinc binding site 2 out
of 2 in the Solution Structure of Ring Finger From Human Ring Finger Protein 24
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Solution Structure of Ring Finger From Human Ring Finger Protein 24 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn300
b:0.0
occ:1.00
|
ND1
|
A:HIS98
|
2.0
|
0.0
|
1.0
|
SG
|
A:CYS118
|
2.2
|
0.0
|
1.0
|
SG
|
A:CYS115
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS96
|
2.4
|
0.0
|
1.0
|
H
|
A:CYS118
|
2.7
|
0.0
|
1.0
|
HB2
|
A:HIS98
|
2.9
|
0.0
|
1.0
|
CE1
|
A:HIS98
|
2.9
|
0.0
|
1.0
|
HB2
|
A:CYS96
|
2.9
|
0.0
|
1.0
|
CG
|
A:HIS98
|
3.0
|
0.0
|
1.0
|
HB3
|
A:CYS115
|
3.0
|
0.0
|
1.0
|
HE1
|
A:HIS98
|
3.1
|
0.0
|
1.0
|
CB
|
A:CYS115
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS96
|
3.2
|
0.0
|
1.0
|
HB2
|
A:LEU117
|
3.3
|
0.0
|
1.0
|
HB2
|
A:CYS115
|
3.3
|
0.0
|
1.0
|
HB3
|
A:CYS118
|
3.3
|
0.0
|
1.0
|
CB
|
A:HIS98
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS118
|
3.4
|
0.0
|
1.0
|
N
|
A:CYS118
|
3.6
|
0.0
|
1.0
|
HB3
|
A:HIS98
|
3.7
|
0.0
|
1.0
|
HB3
|
A:CYS96
|
3.8
|
0.0
|
1.0
|
O
|
A:CYS96
|
3.8
|
0.0
|
1.0
|
HZ
|
A:PHE100
|
4.0
|
0.0
|
1.0
|
HB3
|
A:LEU117
|
4.0
|
0.0
|
1.0
|
NE2
|
A:HIS98
|
4.0
|
0.0
|
1.0
|
CB
|
A:LEU117
|
4.1
|
0.0
|
1.0
|
CD2
|
A:HIS98
|
4.1
|
0.0
|
1.0
|
CA
|
A:CYS118
|
4.1
|
0.0
|
1.0
|
HE1
|
A:PHE100
|
4.1
|
0.0
|
1.0
|
H
|
A:ASN119
|
4.2
|
0.0
|
1.0
|
H
|
A:LEU117
|
4.2
|
0.0
|
1.0
|
HB2
|
A:CYS118
|
4.3
|
0.0
|
1.0
|
CA
|
A:CYS96
|
4.5
|
0.0
|
1.0
|
C
|
A:CYS96
|
4.5
|
0.0
|
1.0
|
CA
|
A:CYS115
|
4.6
|
0.0
|
1.0
|
C
|
A:LEU117
|
4.7
|
0.0
|
1.0
|
H
|
A:MET120
|
4.7
|
0.0
|
1.0
|
HD13
|
A:LEU117
|
4.7
|
0.0
|
1.0
|
HD12
|
A:LEU117
|
4.7
|
0.0
|
1.0
|
CA
|
A:HIS98
|
4.8
|
0.0
|
1.0
|
CZ
|
A:PHE100
|
4.8
|
0.0
|
1.0
|
CA
|
A:LEU117
|
4.8
|
0.0
|
1.0
|
HB3
|
A:MET120
|
4.8
|
0.0
|
1.0
|
CE1
|
A:PHE100
|
4.9
|
0.0
|
1.0
|
N
|
A:LEU117
|
4.9
|
0.0
|
1.0
|
HE2
|
A:HIS98
|
4.9
|
0.0
|
1.0
|
N
|
A:ASN119
|
4.9
|
0.0
|
1.0
|
HA
|
A:CYS118
|
4.9
|
0.0
|
1.0
|
N
|
A:HIS98
|
5.0
|
0.0
|
1.0
|
|
Reference:
T.Nagashima,
F.Hayashi,
S.Yokoyama.
Solution Structure of Ring Finger From Human Ring Finger Protein 24 To Be Published.
Page generated: Wed Oct 16 23:27:30 2024
|