Zinc in PDB 2ep4: Solution Structure of Ring Finger From Human Ring Finger Protein 24

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of Ring Finger From Human Ring Finger Protein 24 (pdb code 2ep4). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of Ring Finger From Human Ring Finger Protein 24, PDB code: 2ep4:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2ep4

Go back to Zinc Binding Sites List in 2ep4
Zinc binding site 1 out of 2 in the Solution Structure of Ring Finger From Human Ring Finger Protein 24


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of Ring Finger From Human Ring Finger Protein 24 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn200

b:0.0
occ:1.00
ND1 A:HIS101 2.0 0.0 1.0
SG A:CYS104 2.2 0.0 1.0
SG A:CYS78 2.3 0.0 1.0
SG A:CYS81 2.3 0.0 1.0
HB2 A:HIS101 2.8 0.0 1.0
H A:CYS81 3.0 0.0 1.0
CE1 A:HIS101 3.0 0.0 1.0
CG A:HIS101 3.1 0.0 1.0
HB3 A:CYS81 3.2 0.0 1.0
HB2 A:CYS78 3.2 0.0 1.0
HE1 A:HIS101 3.2 0.0 1.0
CB A:CYS78 3.2 0.0 1.0
HB3 A:CYS78 3.3 0.0 1.0
HB2 A:CYS104 3.3 0.0 1.0
CB A:CYS81 3.4 0.0 1.0
CB A:CYS104 3.4 0.0 1.0
CB A:HIS101 3.4 0.0 1.0
H A:HIS101 3.5 0.0 1.0
HB A:VAL80 3.7 0.0 1.0
HB3 A:CYS104 3.7 0.0 1.0
N A:CYS81 3.8 0.0 1.0
H A:LEU82 4.0 0.0 1.0
HB3 A:HIS101 4.1 0.0 1.0
NE2 A:HIS101 4.1 0.0 1.0
CD2 A:HIS101 4.2 0.0 1.0
CA A:CYS81 4.2 0.0 1.0
HB2 A:CYS81 4.2 0.0 1.0
H A:GLU83 4.3 0.0 1.0
N A:HIS101 4.3 0.0 1.0
HB2 A:GLU83 4.5 0.0 1.0
CA A:HIS101 4.5 0.0 1.0
H A:CYS104 4.6 0.0 1.0
H A:VAL80 4.6 0.0 1.0
N A:LEU82 4.6 0.0 1.0
CA A:CYS78 4.7 0.0 1.0
HE1 A:PHE85 4.7 0.0 1.0
CB A:VAL80 4.7 0.0 1.0
CA A:CYS104 4.8 0.0 1.0
H A:ALA79 4.8 0.0 1.0
C A:CYS81 4.8 0.0 1.0
HB3 A:PHE100 4.9 0.0 1.0
HA A:CYS78 4.9 0.0 1.0
C A:VAL80 5.0 0.0 1.0
HG3 A:LYS103 5.0 0.0 1.0
HE2 A:HIS101 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 2ep4

Go back to Zinc Binding Sites List in 2ep4
Zinc binding site 2 out of 2 in the Solution Structure of Ring Finger From Human Ring Finger Protein 24


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of Ring Finger From Human Ring Finger Protein 24 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn300

b:0.0
occ:1.00
ND1 A:HIS98 2.0 0.0 1.0
SG A:CYS118 2.2 0.0 1.0
SG A:CYS115 2.3 0.0 1.0
SG A:CYS96 2.4 0.0 1.0
H A:CYS118 2.7 0.0 1.0
HB2 A:HIS98 2.9 0.0 1.0
CE1 A:HIS98 2.9 0.0 1.0
HB2 A:CYS96 2.9 0.0 1.0
CG A:HIS98 3.0 0.0 1.0
HB3 A:CYS115 3.0 0.0 1.0
HE1 A:HIS98 3.1 0.0 1.0
CB A:CYS115 3.2 0.0 1.0
CB A:CYS96 3.2 0.0 1.0
HB2 A:LEU117 3.3 0.0 1.0
HB2 A:CYS115 3.3 0.0 1.0
HB3 A:CYS118 3.3 0.0 1.0
CB A:HIS98 3.4 0.0 1.0
CB A:CYS118 3.4 0.0 1.0
N A:CYS118 3.6 0.0 1.0
HB3 A:HIS98 3.7 0.0 1.0
HB3 A:CYS96 3.8 0.0 1.0
O A:CYS96 3.8 0.0 1.0
HZ A:PHE100 4.0 0.0 1.0
HB3 A:LEU117 4.0 0.0 1.0
NE2 A:HIS98 4.0 0.0 1.0
CB A:LEU117 4.1 0.0 1.0
CD2 A:HIS98 4.1 0.0 1.0
CA A:CYS118 4.1 0.0 1.0
HE1 A:PHE100 4.1 0.0 1.0
H A:ASN119 4.2 0.0 1.0
H A:LEU117 4.2 0.0 1.0
HB2 A:CYS118 4.3 0.0 1.0
CA A:CYS96 4.5 0.0 1.0
C A:CYS96 4.5 0.0 1.0
CA A:CYS115 4.6 0.0 1.0
C A:LEU117 4.7 0.0 1.0
H A:MET120 4.7 0.0 1.0
HD13 A:LEU117 4.7 0.0 1.0
HD12 A:LEU117 4.7 0.0 1.0
CA A:HIS98 4.8 0.0 1.0
CZ A:PHE100 4.8 0.0 1.0
CA A:LEU117 4.8 0.0 1.0
HB3 A:MET120 4.8 0.0 1.0
CE1 A:PHE100 4.9 0.0 1.0
N A:LEU117 4.9 0.0 1.0
HE2 A:HIS98 4.9 0.0 1.0
N A:ASN119 4.9 0.0 1.0
HA A:CYS118 4.9 0.0 1.0
N A:HIS98 5.0 0.0 1.0

Reference:

T.Nagashima, F.Hayashi, S.Yokoyama. Solution Structure of Ring Finger From Human Ring Finger Protein 24 To Be Published.
Page generated: Wed Oct 16 23:27:30 2024

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