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Zinc in PDB 2egq: Solution Structure of the Fourth Lim Domain From Human Four and A Half Lim Domains 1

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the Fourth Lim Domain From Human Four and A Half Lim Domains 1 (pdb code 2egq). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Fourth Lim Domain From Human Four and A Half Lim Domains 1, PDB code: 2egq:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2egq

Go back to Zinc Binding Sites List in 2egq
Zinc binding site 1 out of 2 in the Solution Structure of the Fourth Lim Domain From Human Four and A Half Lim Domains 1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Fourth Lim Domain From Human Four and A Half Lim Domains 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn200

b:0.0
occ:1.00
ND1 A:HIS43 2.0 0.0 1.0
SG A:CYS18 2.3 0.0 1.0
SG A:CYS21 2.3 0.0 1.0
SG A:CYS46 2.3 0.0 1.0
CE1 A:HIS43 2.8 0.0 1.0
HE1 A:HIS43 2.8 0.0 1.0
HB2 A:CYS18 3.1 0.0 1.0
CB A:CYS18 3.1 0.0 1.0
HB3 A:CYS18 3.1 0.0 1.0
H A:CYS21 3.1 0.0 1.0
CG A:HIS43 3.2 0.0 1.0
HB2 A:HIS43 3.2 0.0 1.0
H A:HIS43 3.2 0.0 1.0
HB2 A:CYS46 3.2 0.0 1.0
HB3 A:CYS21 3.3 0.0 1.0
CB A:CYS46 3.3 0.0 1.0
CB A:CYS21 3.5 0.0 1.0
HB3 A:CYS46 3.6 0.0 1.0
HE1 A:TYR45 3.6 0.0 1.0
CB A:HIS43 3.7 0.0 1.0
N A:CYS21 3.9 0.0 1.0
NE2 A:HIS43 4.0 0.0 1.0
N A:HIS43 4.1 0.0 1.0
CE1 A:TYR45 4.1 0.0 1.0
CD2 A:HIS43 4.2 0.0 1.0
OH A:TYR45 4.2 0.0 1.0
H A:GLY20 4.2 0.0 1.0
CA A:CYS21 4.3 0.0 1.0
HB2 A:CYS21 4.3 0.0 1.0
HA A:TRP42 4.4 0.0 1.0
CZ A:TYR45 4.4 0.0 1.0
HA3 A:GLY20 4.6 0.0 1.0
HB3 A:HIS43 4.6 0.0 1.0
CA A:HIS43 4.6 0.0 1.0
CA A:CYS18 4.6 0.0 1.0
H A:LYS22 4.6 0.0 1.0
HH A:TYR45 4.7 0.0 1.0
CA A:CYS46 4.7 0.0 1.0
HE2 A:HIS43 4.8 0.0 1.0
C A:GLY20 4.8 0.0 1.0
HB2 A:ASN23 4.8 0.0 1.0
H A:ASN23 4.9 0.0 1.0
HA A:CYS18 4.9 0.0 1.0
N A:GLY20 4.9 0.0 1.0
H A:CYS46 4.9 0.0 1.0
HG12 A:ILE25 5.0 0.0 1.0
CD1 A:TYR45 5.0 0.0 1.0
CA A:GLY20 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 2egq

Go back to Zinc Binding Sites List in 2egq
Zinc binding site 2 out of 2 in the Solution Structure of the Fourth Lim Domain From Human Four and A Half Lim Domains 1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Fourth Lim Domain From Human Four and A Half Lim Domains 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn300

b:0.0
occ:1.00
SG A:CYS52 2.2 0.0 1.0
SG A:CYS49 2.3 0.0 1.0
SG A:CYS73 2.3 0.0 1.0
SG A:CYS70 2.3 0.0 1.0
HB2 A:CYS73 2.8 0.0 1.0
H A:CYS52 3.0 0.0 1.0
HB2 A:CYS49 3.0 0.0 1.0
CB A:CYS49 3.1 0.0 1.0
HB3 A:CYS49 3.1 0.0 1.0
HG12 A:VAL54 3.2 0.0 1.0
CB A:CYS73 3.2 0.0 1.0
HB3 A:CYS52 3.5 0.0 1.0
H A:CYS70 3.5 0.0 1.0
CB A:CYS52 3.5 0.0 1.0
HB3 A:LYS51 3.6 0.0 1.0
H A:CYS73 3.7 0.0 1.0
HB3 A:CYS73 3.8 0.0 1.0
N A:CYS52 3.8 0.0 1.0
CB A:CYS70 4.0 0.0 1.0
CG1 A:VAL54 4.1 0.0 1.0
HB3 A:CYS70 4.2 0.0 1.0
HG13 A:VAL54 4.2 0.0 1.0
CA A:CYS52 4.2 0.0 1.0
N A:CYS70 4.3 0.0 1.0
H A:LYS51 4.3 0.0 1.0
CA A:CYS73 4.4 0.0 1.0
HB2 A:CYS52 4.4 0.0 1.0
H A:SER53 4.4 0.0 1.0
N A:CYS73 4.4 0.0 1.0
HD1 A:TYR69 4.4 0.0 1.0
H A:VAL54 4.5 0.0 1.0
CB A:LYS51 4.5 0.0 1.0
HB A:VAL54 4.5 0.0 1.0
HA A:TYR69 4.5 0.0 1.0
CA A:CYS49 4.5 0.0 1.0
HB3 A:ASP72 4.6 0.0 1.0
HB2 A:LYS51 4.6 0.0 1.0
HB2 A:CYS70 4.7 0.0 1.0
CA A:CYS70 4.7 0.0 1.0
HA A:CYS73 4.8 0.0 1.0
HG11 A:VAL54 4.8 0.0 1.0
HA A:CYS49 4.9 0.0 1.0
C A:LYS51 4.9 0.0 1.0
N A:SER53 4.9 0.0 1.0
C A:CYS52 4.9 0.0 1.0
CB A:VAL54 5.0 0.0 1.0
N A:LYS51 5.0 0.0 1.0
HB3 A:TYR69 5.0 0.0 1.0

Reference:

K.Inoue, F.Hayashi, S.Yokoyama. Solution Structure of the Fourth Lim Domain From Human Four and A Half Lim Domains 1 To Be Published.
Page generated: Wed Oct 16 23:08:34 2024

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