Zinc in PDB 2ecw: Solution Structure of the Zinc Finger, C3HC4 Type (Ring Finger) Domain Tripartite Motif Protein 30
Zinc Binding Sites:
The binding sites of Zinc atom in the Solution Structure of the Zinc Finger, C3HC4 Type (Ring Finger) Domain Tripartite Motif Protein 30
(pdb code 2ecw). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Solution Structure of the Zinc Finger, C3HC4 Type (Ring Finger) Domain Tripartite Motif Protein 30, PDB code: 2ecw:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 2ecw
Go back to
Zinc Binding Sites List in 2ecw
Zinc binding site 1 out
of 2 in the Solution Structure of the Zinc Finger, C3HC4 Type (Ring Finger) Domain Tripartite Motif Protein 30
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Solution Structure of the Zinc Finger, C3HC4 Type (Ring Finger) Domain Tripartite Motif Protein 30 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn201
b:0.0
occ:1.00
|
SG
|
A:CYS45
|
2.2
|
0.0
|
1.0
|
SG
|
A:CYS25
|
2.2
|
0.0
|
1.0
|
SG
|
A:CYS42
|
2.4
|
0.0
|
1.0
|
SG
|
A:CYS22
|
2.4
|
0.0
|
1.0
|
HB2
|
A:CYS42
|
2.9
|
0.0
|
1.0
|
H
|
A:CYS25
|
3.0
|
0.0
|
1.0
|
HB3
|
A:CYS25
|
3.1
|
0.0
|
1.0
|
HB3
|
A:CYS22
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS42
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS22
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS25
|
3.3
|
0.0
|
1.0
|
HB2
|
A:CYS22
|
3.3
|
0.0
|
1.0
|
HB2
|
A:CYS45
|
3.4
|
0.0
|
1.0
|
HB
|
A:ILE24
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS45
|
3.4
|
0.0
|
1.0
|
H
|
A:CYS42
|
3.4
|
0.0
|
1.0
|
N
|
A:CYS25
|
3.8
|
0.0
|
1.0
|
HB3
|
A:CYS45
|
3.8
|
0.0
|
1.0
|
HB3
|
A:CYS42
|
3.9
|
0.0
|
1.0
|
HB2
|
A:CYS25
|
4.1
|
0.0
|
1.0
|
CA
|
A:CYS25
|
4.2
|
0.0
|
1.0
|
N
|
A:CYS42
|
4.2
|
0.0
|
1.0
|
HG22
|
A:ILE24
|
4.2
|
0.0
|
1.0
|
CA
|
A:CYS42
|
4.4
|
0.0
|
1.0
|
CB
|
A:ILE24
|
4.4
|
0.0
|
1.0
|
H
|
A:LEU26
|
4.4
|
0.0
|
1.0
|
H
|
A:CYS45
|
4.5
|
0.0
|
1.0
|
H
|
A:ILE24
|
4.5
|
0.0
|
1.0
|
HD21
|
A:LEU29
|
4.7
|
0.0
|
1.0
|
H
|
A:GLU27
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS22
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS45
|
4.7
|
0.0
|
1.0
|
HD23
|
A:LEU29
|
4.8
|
0.0
|
1.0
|
HD11
|
A:ILE24
|
4.9
|
0.0
|
1.0
|
HB3
|
A:PHE41
|
4.9
|
0.0
|
1.0
|
C
|
A:ILE24
|
4.9
|
0.0
|
1.0
|
CG2
|
A:ILE24
|
4.9
|
0.0
|
1.0
|
HA
|
A:CYS25
|
5.0
|
0.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 2ecw
Go back to
Zinc Binding Sites List in 2ecw
Zinc binding site 2 out
of 2 in the Solution Structure of the Zinc Finger, C3HC4 Type (Ring Finger) Domain Tripartite Motif Protein 30
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Solution Structure of the Zinc Finger, C3HC4 Type (Ring Finger) Domain Tripartite Motif Protein 30 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn401
b:0.0
occ:1.00
|
ND1
|
A:HIS39
|
2.0
|
0.0
|
1.0
|
SG
|
A:CYS62
|
2.2
|
0.0
|
1.0
|
SG
|
A:CYS65
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS37
|
2.4
|
0.0
|
1.0
|
CE1
|
A:HIS39
|
2.9
|
0.0
|
1.0
|
HB2
|
A:CYS37
|
2.9
|
0.0
|
1.0
|
HB2
|
A:HIS39
|
3.0
|
0.0
|
1.0
|
H
|
A:CYS65
|
3.0
|
0.0
|
1.0
|
CG
|
A:HIS39
|
3.1
|
0.0
|
1.0
|
HE1
|
A:HIS39
|
3.1
|
0.0
|
1.0
|
HB
|
A:VAL64
|
3.1
|
0.0
|
1.0
|
CB
|
A:CYS37
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS62
|
3.2
|
0.0
|
1.0
|
HB3
|
A:CYS62
|
3.3
|
0.0
|
1.0
|
HB2
|
A:CYS62
|
3.4
|
0.0
|
1.0
|
HZ
|
A:PHE41
|
3.5
|
0.0
|
1.0
|
HB3
|
A:CYS65
|
3.5
|
0.0
|
1.0
|
CB
|
A:HIS39
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS65
|
3.5
|
0.0
|
1.0
|
HG11
|
A:VAL67
|
3.6
|
0.0
|
1.0
|
HG12
|
A:VAL67
|
3.7
|
0.0
|
1.0
|
HB3
|
A:CYS37
|
3.7
|
0.0
|
1.0
|
HB3
|
A:HIS39
|
3.7
|
0.0
|
1.0
|
N
|
A:CYS65
|
3.8
|
0.0
|
1.0
|
NE2
|
A:HIS39
|
4.0
|
0.0
|
1.0
|
CD2
|
A:HIS39
|
4.1
|
0.0
|
1.0
|
CG1
|
A:VAL67
|
4.2
|
0.0
|
1.0
|
O
|
A:CYS37
|
4.2
|
0.0
|
1.0
|
CB
|
A:VAL64
|
4.2
|
0.0
|
1.0
|
CA
|
A:CYS65
|
4.2
|
0.0
|
1.0
|
H
|
A:VAL64
|
4.3
|
0.0
|
1.0
|
HG13
|
A:VAL64
|
4.3
|
0.0
|
1.0
|
HB2
|
A:CYS65
|
4.4
|
0.0
|
1.0
|
H
|
A:ARG66
|
4.4
|
0.0
|
1.0
|
H
|
A:VAL67
|
4.5
|
0.0
|
1.0
|
CZ
|
A:PHE41
|
4.5
|
0.0
|
1.0
|
CA
|
A:CYS37
|
4.6
|
0.0
|
1.0
|
HG21
|
A:VAL64
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS62
|
4.7
|
0.0
|
1.0
|
C
|
A:VAL64
|
4.7
|
0.0
|
1.0
|
C
|
A:CYS37
|
4.8
|
0.0
|
1.0
|
CG1
|
A:VAL64
|
4.8
|
0.0
|
1.0
|
HG13
|
A:VAL67
|
4.8
|
0.0
|
1.0
|
CA
|
A:VAL64
|
4.9
|
0.0
|
1.0
|
HE2
|
A:HIS39
|
4.9
|
0.0
|
1.0
|
CA
|
A:HIS39
|
4.9
|
0.0
|
1.0
|
N
|
A:ARG66
|
4.9
|
0.0
|
1.0
|
N
|
A:VAL64
|
4.9
|
0.0
|
1.0
|
C
|
A:CYS65
|
5.0
|
0.0
|
1.0
|
H
|
A:CYS37
|
5.0
|
0.0
|
1.0
|
HE1
|
A:PHE41
|
5.0
|
0.0
|
1.0
|
HA
|
A:CYS62
|
5.0
|
0.0
|
1.0
|
|
Reference:
H.Abe,
K.Miyamoto,
N.Tochio,
M.Yoneyama,
T.Kigawa,
S.Yokoyama.
Solution Structure of the Zinc Finger, C3HC4 Type (Ring Finger) Domain Tripartite Motif Protein 30 To Be Published.
Page generated: Wed Oct 16 23:05:49 2024
|