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Zinc in PDB 2ect: Solution Structure of the Zinc Finger, C3HC4 Type (Ring Finger) Domain of Ring Finger Protein 126

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the Zinc Finger, C3HC4 Type (Ring Finger) Domain of Ring Finger Protein 126 (pdb code 2ect). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Zinc Finger, C3HC4 Type (Ring Finger) Domain of Ring Finger Protein 126, PDB code: 2ect:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2ect

Go back to Zinc Binding Sites List in 2ect
Zinc binding site 1 out of 2 in the Solution Structure of the Zinc Finger, C3HC4 Type (Ring Finger) Domain of Ring Finger Protein 126


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Zinc Finger, C3HC4 Type (Ring Finger) Domain of Ring Finger Protein 126 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:0.0
occ:1.00
ND1 A:HIS41 2.1 0.0 1.0
SG A:CYS44 2.2 0.0 1.0
SG A:CYS21 2.3 0.0 1.0
SG A:CYS18 2.4 0.0 1.0
HB2 A:HIS41 2.6 0.0 1.0
HB A:VAL20 3.0 0.0 1.0
HB3 A:CYS18 3.0 0.0 1.0
CG A:HIS41 3.1 0.0 1.0
H A:CYS21 3.1 0.0 1.0
CE1 A:HIS41 3.1 0.0 1.0
CB A:CYS18 3.2 0.0 1.0
HB2 A:CYS44 3.2 0.0 1.0
CB A:CYS44 3.3 0.0 1.0
CB A:HIS41 3.3 0.0 1.0
HE1 A:HIS41 3.4 0.0 1.0
HB3 A:CYS21 3.5 0.0 1.0
CB A:CYS21 3.5 0.0 1.0
HB3 A:CYS44 3.6 0.0 1.0
HB2 A:CYS18 3.6 0.0 1.0
N A:CYS21 3.8 0.0 1.0
H A:HIS41 3.8 0.0 1.0
HB3 A:HIS41 3.9 0.0 1.0
HG22 A:VAL20 4.0 0.0 1.0
CB A:VAL20 4.0 0.0 1.0
CD2 A:HIS41 4.2 0.0 1.0
NE2 A:HIS41 4.2 0.0 1.0
CA A:CYS21 4.3 0.0 1.0
HB2 A:CYS21 4.4 0.0 1.0
N A:HIS41 4.5 0.0 1.0
HG13 A:VAL20 4.5 0.0 1.0
CA A:HIS41 4.5 0.0 1.0
H A:LYS22 4.6 0.0 1.0
CG2 A:VAL20 4.6 0.0 1.0
CA A:CYS18 4.6 0.0 1.0
C A:VAL20 4.6 0.0 1.0
H A:VAL20 4.6 0.0 1.0
CA A:CYS44 4.7 0.0 1.0
CA A:VAL20 4.8 0.0 1.0
O A:CYS18 4.8 0.0 1.0
CG1 A:VAL20 4.8 0.0 1.0
H A:GLU23 4.8 0.0 1.0
HB2 A:GLU23 4.8 0.0 1.0
C A:CYS18 4.9 0.0 1.0
H A:CYS44 4.9 0.0 1.0
N A:VAL20 4.9 0.0 1.0

Zinc binding site 2 out of 2 in 2ect

Go back to Zinc Binding Sites List in 2ect
Zinc binding site 2 out of 2 in the Solution Structure of the Zinc Finger, C3HC4 Type (Ring Finger) Domain of Ring Finger Protein 126


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Zinc Finger, C3HC4 Type (Ring Finger) Domain of Ring Finger Protein 126 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:0.0
occ:1.00
ND1 A:HIS38 2.0 0.0 1.0
SG A:CYS58 2.2 0.0 1.0
SG A:CYS36 2.4 0.0 1.0
SG A:CYS55 2.4 0.0 1.0
CE1 A:HIS38 2.9 0.0 1.0
HB2 A:HIS38 3.0 0.0 1.0
H A:CYS58 3.0 0.0 1.0
HE1 A:HIS38 3.1 0.0 1.0
CG A:HIS38 3.1 0.0 1.0
HB2 A:CYS36 3.1 0.0 1.0
CB A:CYS55 3.3 0.0 1.0
HB3 A:CYS55 3.3 0.0 1.0
HB2 A:CYS55 3.3 0.0 1.0
CB A:CYS36 3.3 0.0 1.0
HB A:VAL57 3.4 0.0 1.0
HB3 A:CYS58 3.4 0.0 1.0
CB A:CYS58 3.4 0.0 1.0
CB A:HIS38 3.5 0.0 1.0
HD11 A:LEU34 3.8 0.0 1.0
N A:CYS58 3.8 0.0 1.0
HB2 A:LYS60 3.8 0.0 1.0
HZ A:PHE40 3.8 0.0 1.0
HB3 A:CYS36 3.8 0.0 1.0
HB3 A:HIS38 3.9 0.0 1.0
H A:LYS60 3.9 0.0 1.0
HG3 A:LYS60 4.0 0.0 1.0
NE2 A:HIS38 4.0 0.0 1.0
CD2 A:HIS38 4.1 0.0 1.0
CA A:CYS58 4.1 0.0 1.0
H A:ARG59 4.1 0.0 1.0
HB2 A:CYS58 4.3 0.0 1.0
CB A:VAL57 4.4 0.0 1.0
H A:VAL57 4.4 0.0 1.0
HE1 A:PHE40 4.5 0.0 1.0
O A:CYS36 4.6 0.0 1.0
N A:ARG59 4.6 0.0 1.0
CG A:LYS60 4.6 0.0 1.0
CA A:CYS36 4.6 0.0 1.0
HG2 A:LYS60 4.6 0.0 1.0
HG13 A:VAL57 4.6 0.0 1.0
CB A:LYS60 4.7 0.0 1.0
HB2 A:LEU34 4.7 0.0 1.0
CD1 A:LEU34 4.7 0.0 1.0
C A:CYS58 4.7 0.0 1.0
CA A:CYS55 4.7 0.0 1.0
HD13 A:LEU34 4.7 0.0 1.0
CZ A:PHE40 4.7 0.0 1.0
C A:CYS36 4.8 0.0 1.0
HB3 A:LEU34 4.8 0.0 1.0
C A:VAL57 4.8 0.0 1.0
N A:LYS60 4.8 0.0 1.0
CA A:HIS38 4.9 0.0 1.0
HG11 A:VAL57 4.9 0.0 1.0
HE2 A:HIS38 4.9 0.0 1.0
H A:HIS38 4.9 0.0 1.0
CG1 A:VAL57 4.9 0.0 1.0
HG22 A:VAL57 5.0 0.0 1.0

Reference:

H.Abe, K.Miyamoto, N.Tochio, T.Kigawa, S.Yokoyama. Solution Structure of the Zinc Finger, C3HC4 Type (Ring Finger) Domain of Ring Finger Protein 126 To Be Published.
Page generated: Wed Dec 16 03:23:50 2020

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