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Zinc in PDB 2ecm: Solution Structure of the Ring Domain of the Ring Finger and Chy Zinc Finger Domain-Containing Protein 1 From Mus Musculus

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the Ring Domain of the Ring Finger and Chy Zinc Finger Domain-Containing Protein 1 From Mus Musculus (pdb code 2ecm). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Ring Domain of the Ring Finger and Chy Zinc Finger Domain-Containing Protein 1 From Mus Musculus, PDB code: 2ecm:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2ecm

Go back to Zinc Binding Sites List in 2ecm
Zinc binding site 1 out of 2 in the Solution Structure of the Ring Domain of the Ring Finger and Chy Zinc Finger Domain-Containing Protein 1 From Mus Musculus


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Ring Domain of the Ring Finger and Chy Zinc Finger Domain-Containing Protein 1 From Mus Musculus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:0.0
occ:1.00
ND1 A:HIS32 1.9 0.0 1.0
SG A:CYS35 2.2 0.0 1.0
SG A:CYS11 2.3 0.0 1.0
SG A:CYS8 2.4 0.0 1.0
HB2 A:HIS32 2.8 0.0 1.0
CE1 A:HIS32 2.9 0.0 1.0
CG A:HIS32 3.0 0.0 1.0
HE1 A:HIS32 3.1 0.0 1.0
HB3 A:CYS8 3.2 0.0 1.0
H A:CYS11 3.2 0.0 1.0
HB2 A:CYS35 3.3 0.0 1.0
CB A:CYS8 3.3 0.0 1.0
CB A:CYS35 3.3 0.0 1.0
HB3 A:CYS11 3.3 0.0 1.0
CB A:HIS32 3.4 0.0 1.0
HB2 A:CYS8 3.4 0.0 1.0
CB A:CYS11 3.5 0.0 1.0
HB A:ILE10 3.5 0.0 1.0
HB3 A:CYS35 3.6 0.0 1.0
H A:HIS32 3.8 0.0 1.0
NE2 A:HIS32 4.0 0.0 1.0
N A:CYS11 4.0 0.0 1.0
CD2 A:HIS32 4.1 0.0 1.0
HB3 A:HIS32 4.1 0.0 1.0
N A:HIS32 4.2 0.0 1.0
HB2 A:CYS11 4.3 0.0 1.0
CA A:CYS11 4.4 0.0 1.0
HG22 A:ILE10 4.4 0.0 1.0
H A:CYS35 4.4 0.0 1.0
CA A:HIS32 4.5 0.0 1.0
CB A:ILE10 4.5 0.0 1.0
HD12 A:ILE10 4.6 0.0 1.0
H A:LEU12 4.6 0.0 1.0
CA A:CYS35 4.7 0.0 1.0
HG21 A:ILE10 4.7 0.0 1.0
H A:ILE10 4.7 0.0 1.0
CA A:CYS8 4.7 0.0 1.0
HG12 A:ILE15 4.7 0.0 1.0
CG2 A:ILE10 4.8 0.0 1.0
HA A:LEU31 4.8 0.0 1.0
HE2 A:HIS32 4.9 0.0 1.0
H A:GLU13 4.9 0.0 1.0
HB2 A:GLU13 5.0 0.0 1.0
N A:CYS35 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 2ecm

Go back to Zinc Binding Sites List in 2ecm
Zinc binding site 2 out of 2 in the Solution Structure of the Ring Domain of the Ring Finger and Chy Zinc Finger Domain-Containing Protein 1 From Mus Musculus


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Ring Domain of the Ring Finger and Chy Zinc Finger Domain-Containing Protein 1 From Mus Musculus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:0.0
occ:1.00
ND1 A:HIS29 2.1 0.0 1.0
SG A:CYS46 2.2 0.0 1.0
SG A:CYS49 2.2 0.0 1.0
SG A:CYS27 2.4 0.0 1.0
CE1 A:HIS29 2.6 0.0 1.0
HE1 A:HIS29 2.6 0.0 1.0
HB2 A:CYS27 3.0 0.0 1.0
CG A:HIS29 3.3 0.0 1.0
CB A:CYS27 3.3 0.0 1.0
HB2 A:LEU48 3.3 0.0 1.0
HB2 A:CYS49 3.4 0.0 1.0
H A:CYS49 3.4 0.0 1.0
CB A:CYS49 3.4 0.0 1.0
HB2 A:HIS29 3.5 0.0 1.0
HD11 A:LEU25 3.5 0.0 1.0
CB A:CYS46 3.5 0.0 1.0
HB3 A:CYS46 3.5 0.0 1.0
NE2 A:HIS29 3.8 0.0 1.0
HB2 A:CYS46 3.8 0.0 1.0
HB3 A:CYS27 3.8 0.0 1.0
N A:CYS49 3.9 0.0 1.0
CB A:HIS29 4.0 0.0 1.0
CD2 A:HIS29 4.1 0.0 1.0
CA A:CYS49 4.2 0.0 1.0
HB3 A:CYS49 4.3 0.0 1.0
CB A:LEU48 4.3 0.0 1.0
HD12 A:LEU48 4.4 0.0 1.0
HA A:CYS49 4.5 0.0 1.0
CD1 A:LEU25 4.6 0.0 1.0
H A:LEU48 4.6 0.0 1.0
HE2 A:HIS29 4.6 0.0 1.0
HB3 A:LEU48 4.6 0.0 1.0
CA A:CYS27 4.6 0.0 1.0
HB3 A:HIS29 4.6 0.0 1.0
HB3 A:LEU25 4.7 0.0 1.0
C A:LEU48 4.7 0.0 1.0
HB2 A:LEU25 4.7 0.0 1.0
C A:CYS27 4.7 0.0 1.0
CA A:CYS46 4.8 0.0 1.0
H A:GLY28 4.9 0.0 1.0
HD12 A:LEU25 4.9 0.0 1.0
N A:GLY28 4.9 0.0 1.0
N A:HIS29 4.9 0.0 1.0
H A:HIS29 4.9 0.0 1.0
HD13 A:LEU25 4.9 0.0 1.0
HD11 A:LEU48 5.0 0.0 1.0
H A:CYS27 5.0 0.0 1.0
CA A:LEU48 5.0 0.0 1.0

Reference:

K.Miyamoto, M.Yoneyama, S.Koshiba, S.Watanabe, T.Harada, T.Kigawa, S.Yokoyama. Solution Structure of the Ring Domain of the Ring Finger and Chy Zinc Finger Domain-Containing Protein 1 From Mus Musculus To Be Published.
Page generated: Wed Dec 16 03:23:50 2020

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