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Zinc in PDB 2ea5: Solution Structure of the Ring Domain of the Human Cell Growth Regulator with Ring Finger Domain 1 Protein

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the Ring Domain of the Human Cell Growth Regulator with Ring Finger Domain 1 Protein (pdb code 2ea5). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Ring Domain of the Human Cell Growth Regulator with Ring Finger Domain 1 Protein, PDB code: 2ea5:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2ea5

Go back to Zinc Binding Sites List in 2ea5
Zinc binding site 1 out of 2 in the Solution Structure of the Ring Domain of the Human Cell Growth Regulator with Ring Finger Domain 1 Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Ring Domain of the Human Cell Growth Regulator with Ring Finger Domain 1 Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:0.0
occ:1.00
SG A:CYS42 2.2 0.0 1.0
SG A:CYS21 2.3 0.0 1.0
SG A:CYS18 2.4 0.0 1.0
SG A:CYS39 2.4 0.0 1.0
H A:CYS39 2.8 0.0 1.0
HB2 A:CYS39 3.0 0.0 1.0
H A:CYS21 3.1 0.0 1.0
HB3 A:CYS18 3.2 0.0 1.0
CB A:CYS18 3.2 0.0 1.0
HB2 A:CYS18 3.3 0.0 1.0
CB A:CYS39 3.3 0.0 1.0
HB2 A:CYS42 3.4 0.0 1.0
HB A:VAL20 3.4 0.0 1.0
CB A:CYS42 3.4 0.0 1.0
HB3 A:CYS21 3.4 0.0 1.0
CB A:CYS21 3.5 0.0 1.0
N A:CYS39 3.7 0.0 1.0
N A:CYS21 3.8 0.0 1.0
HB3 A:CYS42 3.8 0.0 1.0
H A:GLN22 4.1 0.0 1.0
H A:GLY24 4.1 0.0 1.0
CA A:CYS39 4.1 0.0 1.0
HB3 A:CYS39 4.2 0.0 1.0
HA A:LEU38 4.2 0.0 1.0
H A:CYS42 4.2 0.0 1.0
CA A:CYS21 4.2 0.0 1.0
H A:ASN23 4.3 0.0 1.0
H A:VAL20 4.4 0.0 1.0
HB2 A:CYS21 4.4 0.0 1.0
CB A:VAL20 4.4 0.0 1.0
N A:GLN22 4.6 0.0 1.0
HG11 A:VAL26 4.7 0.0 1.0
CA A:CYS18 4.7 0.0 1.0
CA A:CYS42 4.7 0.0 1.0
HG12 A:VAL20 4.8 0.0 1.0
C A:CYS21 4.8 0.0 1.0
HA A:CYS39 4.8 0.0 1.0
C A:VAL20 4.8 0.0 1.0
C A:LEU38 4.8 0.0 1.0
N A:CYS42 4.8 0.0 1.0
HD22 A:LEU38 4.9 0.0 1.0
HG21 A:VAL20 5.0 0.0 1.0
N A:GLY24 5.0 0.0 1.0
CA A:LEU38 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 2ea5

Go back to Zinc Binding Sites List in 2ea5
Zinc binding site 2 out of 2 in the Solution Structure of the Ring Domain of the Human Cell Growth Regulator with Ring Finger Domain 1 Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Ring Domain of the Human Cell Growth Regulator with Ring Finger Domain 1 Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:0.0
occ:1.00
ND1 A:HIS35 1.9 0.0 1.0
SG A:CYS52 2.2 0.0 1.0
SG A:CYS49 2.4 0.0 1.0
SG A:CYS33 2.4 0.0 1.0
HB2 A:HIS35 2.6 0.0 1.0
CG A:HIS35 2.6 0.0 1.0
CE1 A:HIS35 2.7 0.0 1.0
H A:CYS52 3.0 0.0 1.0
CB A:HIS35 3.1 0.0 1.0
HB2 A:CYS33 3.1 0.0 1.0
HE1 A:HIS35 3.1 0.0 1.0
HB3 A:CYS52 3.2 0.0 1.0
HB3 A:CYS49 3.2 0.0 1.0
CB A:CYS49 3.3 0.0 1.0
CB A:CYS33 3.3 0.0 1.0
CB A:CYS52 3.3 0.0 1.0
HB2 A:CYS49 3.3 0.0 1.0
HB3 A:CYS33 3.5 0.0 1.0
CD2 A:HIS35 3.6 0.0 1.0
NE2 A:HIS35 3.6 0.0 1.0
HB3 A:HIS35 3.6 0.0 1.0
HB2 A:MET51 3.6 0.0 1.0
N A:CYS52 3.8 0.0 1.0
HE2 A:MET51 3.8 0.0 1.0
H A:HIS35 4.1 0.0 1.0
CA A:CYS52 4.1 0.0 1.0
HB2 A:LEU30 4.1 0.0 1.0
HB2 A:CYS52 4.2 0.0 1.0
HD11 A:LEU30 4.3 0.0 1.0
HB3 A:MET51 4.4 0.0 1.0
CA A:HIS35 4.4 0.0 1.0
H A:ARG53 4.4 0.0 1.0
HE2 A:HIS35 4.4 0.0 1.0
N A:HIS35 4.5 0.0 1.0
CB A:MET51 4.5 0.0 1.0
H A:MET51 4.5 0.0 1.0
HB3 A:GLN54 4.5 0.0 1.0
HD2 A:HIS35 4.5 0.0 1.0
H A:GLN54 4.5 0.0 1.0
CA A:CYS33 4.7 0.0 1.0
CA A:CYS49 4.7 0.0 1.0
O A:LEU30 4.8 0.0 1.0
CE A:MET51 4.8 0.0 1.0
C A:MET51 4.9 0.0 1.0
N A:ARG53 4.9 0.0 1.0
C A:CYS52 4.9 0.0 1.0
HA A:HIS35 5.0 0.0 1.0
C A:CYS33 5.0 0.0 1.0

Reference:

K.Miyamoto, T.Tomizawa, S.Koshiba, S.Watanabe, T.Harada, T.Kigawa, S.Yokoyama. Solution Structure of the Ring Domain of the Human Cell Growth Regulator with Ring Finger Domain 1 Protein To Be Published.
Page generated: Wed Oct 16 23:02:17 2024

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