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Zinc in PDB 2e5s: Solution Structure of the Zf-CCCHX2 Domain of Muscleblind- Like 2, Isoform 1 [Homo Sapiens]

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the Zf-CCCHX2 Domain of Muscleblind- Like 2, Isoform 1 [Homo Sapiens] (pdb code 2e5s). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Zf-CCCHX2 Domain of Muscleblind- Like 2, Isoform 1 [Homo Sapiens], PDB code: 2e5s:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2e5s

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Zinc binding site 1 out of 2 in the Solution Structure of the Zf-CCCHX2 Domain of Muscleblind- Like 2, Isoform 1 [Homo Sapiens]


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Zf-CCCHX2 Domain of Muscleblind- Like 2, Isoform 1 [Homo Sapiens] within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:0.0
occ:1.00
NE2 A:HIS42 2.1 0.0 1.0
SG A:CYS31 2.3 0.0 1.0
SG A:CYS38 2.4 0.0 1.0
SG A:CYS23 2.4 0.0 1.0
HE1 A:HIS42 2.6 0.0 1.0
CE1 A:HIS42 2.6 0.0 1.0
HB2 A:CYS23 3.0 0.0 1.0
CB A:CYS23 3.2 0.0 1.0
CB A:CYS38 3.2 0.0 1.0
HB3 A:CYS38 3.2 0.0 1.0
CD2 A:HIS42 3.3 0.0 1.0
HB2 A:CYS38 3.3 0.0 1.0
HB2 A:PHE40 3.5 0.0 1.0
HB3 A:CYS23 3.5 0.0 1.0
CB A:CYS31 3.5 0.0 1.0
HB2 A:CYS31 3.6 0.0 1.0
HD2 A:PHE40 3.6 0.0 1.0
HB3 A:CYS31 3.7 0.0 1.0
HD2 A:HIS42 3.7 0.0 1.0
ND1 A:HIS42 3.9 0.0 1.0
HB2 A:PHE26 4.0 0.0 1.0
H A:PHE26 4.2 0.0 1.0
CG A:HIS42 4.2 0.0 1.0
HB3 A:PHE26 4.3 0.0 1.0
HB2 A:ARG33 4.3 0.0 1.0
O A:PHE40 4.3 0.0 1.0
H A:GLY34 4.4 0.0 1.0
HB2 A:GLU25 4.5 0.0 1.0
CB A:PHE40 4.5 0.0 1.0
CA A:CYS23 4.6 0.0 1.0
CD2 A:PHE40 4.6 0.0 1.0
O A:GLY34 4.6 0.0 1.0
HD1 A:HIS42 4.7 0.0 1.0
CB A:PHE26 4.7 0.0 1.0
H A:PHE40 4.7 0.0 1.0
CA A:CYS38 4.7 0.0 1.0
HA2 A:GLY34 4.7 0.0 1.0
HA A:CYS23 4.8 0.0 1.0
C A:GLY34 4.8 0.0 1.0
N A:GLY34 4.8 0.0 1.0
CA A:CYS31 4.9 0.0 1.0
HA A:GLU35 5.0 0.0 1.0
HA A:CYS38 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 2e5s

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Zinc binding site 2 out of 2 in the Solution Structure of the Zf-CCCHX2 Domain of Muscleblind- Like 2, Isoform 1 [Homo Sapiens]


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Zf-CCCHX2 Domain of Muscleblind- Like 2, Isoform 1 [Homo Sapiens] within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:0.0
occ:1.00
NE2 A:HIS76 2.0 0.0 1.0
SG A:CYS72 2.2 0.0 1.0
SG A:CYS67 2.3 0.0 1.0
SG A:CYS59 2.4 0.0 1.0
CE1 A:HIS76 2.8 0.0 1.0
HE1 A:HIS76 2.9 0.0 1.0
HB2 A:TYR62 3.0 0.0 1.0
HB2 A:CYS59 3.1 0.0 1.0
CD2 A:HIS76 3.2 0.0 1.0
CB A:CYS59 3.2 0.0 1.0
HB2 A:CYS67 3.3 0.0 1.0
HB3 A:CYS59 3.4 0.0 1.0
CB A:CYS67 3.5 0.0 1.0
HB2 A:CYS72 3.5 0.0 1.0
CB A:CYS72 3.5 0.0 1.0
HD2 A:HIS76 3.6 0.0 1.0
HB3 A:CYS72 3.8 0.0 1.0
CB A:TYR62 4.0 0.0 1.0
H A:TYR62 4.0 0.0 1.0
ND1 A:HIS76 4.0 0.0 1.0
HB3 A:CYS67 4.0 0.0 1.0
HB3 A:TYR62 4.2 0.0 1.0
CG A:HIS76 4.2 0.0 1.0
HD2 A:TYR74 4.3 0.0 1.0
HB2 A:TYR74 4.4 0.0 1.0
HB2 A:ARG69 4.4 0.0 1.0
HB2 A:ASP61 4.6 0.0 1.0
CA A:CYS59 4.7 0.0 1.0
CA A:CYS67 4.7 0.0 1.0
N A:TYR62 4.7 0.0 1.0
HA A:CYS67 4.7 0.0 1.0
H A:TYR74 4.8 0.0 1.0
CG A:TYR62 4.8 0.0 1.0
CA A:CYS72 4.8 0.0 1.0
HD1 A:HIS76 4.9 0.0 1.0
HA A:CYS59 4.9 0.0 1.0
CA A:TYR62 4.9 0.0 1.0
H A:ARG69 4.9 0.0 1.0
HA A:CYS72 5.0 0.0 1.0

Reference:

F.He, W.Dang, C.Abe, K.Tsuda, M.Inoue, S.Watanabe, N.Kobayashi, T.Kigawa, T.Matsuda, T.Yabuki, M.Aoki, E.Seki, T.Harada, Y.Tomabechi, T.Terada, M.Shirouzu, A.Tanaka, P.Guntert, Y.Muto, S.Yokoyama. Solution Structure of the Rna Binding Domain in the Human Muscleblind-Like Protein 2 Protein Sci. V. 18 80 2009.
ISSN: ISSN 0961-8368
PubMed: 19177353
DOI: 10.1002/PRO.17
Page generated: Wed Dec 16 03:22:57 2020

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