Zinc in PDB 2dwj: Structure of the Complex of C-Terminal Lobe of Bovine Lactoferrin with Raffinose at 2.3 A Resolution

The structure of Structure of the Complex of C-Terminal Lobe of Bovine Lactoferrin with Raffinose at 2.3 A Resolution, PDB code: 2dwj was solved by R.Mir, N.Singh, M.Sinha, S.Sharma, A.Bhushan, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	17.46 / 2.30
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	63.670, 50.430, 65.950, 90.00, 107.90, 90.00
R / Rfree (%)	17.8 / 20.7

The structure of Structure of the Complex of C-Terminal Lobe of Bovine Lactoferrin with Raffinose at 2.3 A Resolution also contains other interesting chemical elements:

Iron

(Fe)

1 atom

The binding sites of Zinc atom in the Structure of the Complex of C-Terminal Lobe of Bovine Lactoferrin with Raffinose at 2.3 A Resolution (pdb code 2dwj). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of the Complex of C-Terminal Lobe of Bovine Lactoferrin with Raffinose at 2.3 A Resolution, PDB code: 2dwj:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Structure of the Complex of C-Terminal Lobe of Bovine Lactoferrin with Raffinose at 2.3 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of the Complex of C-Terminal Lobe of Bovine Lactoferrin with Raffinose at 2.3 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn1101 b:35.2 occ:1.00 O A:HOH2144 2.2 32.7 1.0 OE2 A:GLU659 2.2 34.9 1.0 OE1 A:GLU659 2.4 32.7 1.0 CD A:GLU659 2.6 32.5 1.0 O A:GLY653 4.1 39.6 1.0 CG A:GLU659 4.1 31.5 1.0 O A:ARG654 4.3 35.9 1.0 CA A:PRO655 4.7 32.0 1.0 N A:THR656 4.9 29.6 1.0 CB A:GLU659 4.9 31.0 1.0 C A:ARG654 4.9 36.5 1.0 CG2 A:THR656 5.0 29.9 1.0

Zinc binding site 2 out of 2 in the Structure of the Complex of C-Terminal Lobe of Bovine Lactoferrin with Raffinose at 2.3 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of the Complex of C-Terminal Lobe of Bovine Lactoferrin with Raffinose at 2.3 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn1102 b:44.3 occ:1.00 O A:HOH2203 2.1 75.9 1.0 O A:HOH2192 2.1 74.5 1.0 NE2 A:HIS588 2.1 33.9 1.0 CE1 A:HIS588 3.0 33.4 1.0 O A:HOH2056 3.1 63.6 1.0 CD2 A:HIS588 3.1 32.6 1.0 O A:HOH2124 4.0 43.9 1.0 ND1 A:HIS588 4.2 33.3 1.0 CG A:HIS588 4.2 32.8 1.0 CG1 A:VAL591 4.3 34.1 1.0 O A:HOH2236 4.8 45.6 1.0

R.Mir, N.Singh, M.Sinha, S.Sharma, A.Bhushan, T.P.Singh. Structure of the Complex of C-Terminal Lobe of Bovine Lactoferrin with Raffinose at 2.3 Resolution To Be Published.