Atomistry » Zinc » PDB 2dqv-2e2i » 2dwi
Atomistry »
  Zinc »
    PDB 2dqv-2e2i »
      2dwi »

Zinc in PDB 2dwi: Crystal Structure of the Complex Formed Between C-Terminal Half of Bovine Lactoferrin and Cellobiose at 2.2 A Resolution

Protein crystallography data

The structure of Crystal Structure of the Complex Formed Between C-Terminal Half of Bovine Lactoferrin and Cellobiose at 2.2 A Resolution, PDB code: 2dwi was solved by R.Prem Kumar, R.Mir, M.Sinha, N.Singh, S.Sharma, P.Kaur, A.Bhushan, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.20
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 63.472, 50.439, 65.930, 90.00, 107.78, 90.00
R / Rfree (%) 18.4 / 22.1

Other elements in 2dwi:

The structure of Crystal Structure of the Complex Formed Between C-Terminal Half of Bovine Lactoferrin and Cellobiose at 2.2 A Resolution also contains other interesting chemical elements:

Iron (Fe) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of the Complex Formed Between C-Terminal Half of Bovine Lactoferrin and Cellobiose at 2.2 A Resolution (pdb code 2dwi). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of the Complex Formed Between C-Terminal Half of Bovine Lactoferrin and Cellobiose at 2.2 A Resolution, PDB code: 2dwi:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2dwi

Go back to Zinc Binding Sites List in 2dwi
Zinc binding site 1 out of 2 in the Crystal Structure of the Complex Formed Between C-Terminal Half of Bovine Lactoferrin and Cellobiose at 2.2 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Complex Formed Between C-Terminal Half of Bovine Lactoferrin and Cellobiose at 2.2 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1003

b:22.9
occ:1.00
O A:HOH1174 2.0 25.8 1.0
OE2 A:GLU659 2.1 24.8 1.0
OE1 A:GLU659 2.4 21.0 1.0
CD A:GLU659 2.6 23.8 1.0
O A:GLY653 3.9 28.6 1.0
CG A:GLU659 4.1 20.5 1.0
O A:HOH1301 4.4 52.6 1.0
O A:ARG654 4.5 22.0 1.0
O A:HOH1258 4.5 40.7 1.0
CA A:PRO655 4.6 22.7 1.0
N A:THR656 4.9 21.8 1.0
CB A:GLU659 4.9 20.0 1.0

Zinc binding site 2 out of 2 in 2dwi

Go back to Zinc Binding Sites List in 2dwi
Zinc binding site 2 out of 2 in the Crystal Structure of the Complex Formed Between C-Terminal Half of Bovine Lactoferrin and Cellobiose at 2.2 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of the Complex Formed Between C-Terminal Half of Bovine Lactoferrin and Cellobiose at 2.2 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1004

b:21.9
occ:1.00
O A:HOH1290 2.0 23.9 1.0
NE2 A:HIS588 2.1 22.2 1.0
O A:HOH1289 2.2 41.3 1.0
O A:HOH1227 2.9 35.7 1.0
CE1 A:HIS588 3.0 22.5 1.0
CD2 A:HIS588 3.1 21.4 1.0
O A:HOH1207 4.1 32.1 1.0
ND1 A:HIS588 4.2 19.9 1.0
CG A:HIS588 4.3 19.4 1.0
CG1 A:VAL591 4.4 24.4 1.0
O A:HOH1264 4.6 49.9 1.0
O A:HOH1100 4.8 28.5 1.0

Reference:

R.Prem Kumar, R.Mir, M.Sinha, N.Singh, S.Sharma, P.Kaur, A.Bhushan, T.P.Singh. Crystal Structure of the Complex Formed Between C-Terminal Half of Bovine Lactoferrin and Cellobiose at 2.2 A Resolution To Be Published.
Page generated: Wed Dec 16 03:22:19 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy