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Zinc in PDB 2d9m: Solution Structure of Ccch Type Zinc-Finger Domain 3 in Zinc Finger Ccch-Type Domain Containing 7A

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of Ccch Type Zinc-Finger Domain 3 in Zinc Finger Ccch-Type Domain Containing 7A (pdb code 2d9m). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Solution Structure of Ccch Type Zinc-Finger Domain 3 in Zinc Finger Ccch-Type Domain Containing 7A, PDB code: 2d9m:

Zinc binding site 1 out of 1 in 2d9m

Go back to Zinc Binding Sites List in 2d9m
Zinc binding site 1 out of 1 in the Solution Structure of Ccch Type Zinc-Finger Domain 3 in Zinc Finger Ccch-Type Domain Containing 7A


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of Ccch Type Zinc-Finger Domain 3 in Zinc Finger Ccch-Type Domain Containing 7A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1085

b:0.0
occ:1.00
SG A:CYS907 2.3 0.0 1.0
SG A:CYS915 2.3 0.0 1.0
SG A:CYS921 2.3 0.0 1.0
NE2 A:HIS925 2.3 0.0 1.0
HB2 A:CYS907 3.2 0.0 1.0
HB2 A:CYS915 3.2 0.0 1.0
HB2 A:GLU917 3.2 0.0 1.0
CD2 A:HIS925 3.3 0.0 1.0
CB A:CYS907 3.3 0.0 1.0
CE1 A:HIS925 3.3 0.0 1.0
HB2 A:CYS921 3.4 0.0 1.0
CB A:CYS915 3.4 0.0 1.0
HD2 A:HIS925 3.4 0.0 1.0
CB A:CYS921 3.4 0.0 1.0
HB3 A:CYS907 3.5 0.0 1.0
HE1 A:HIS925 3.6 0.0 1.0
HB2 A:PHE923 3.6 0.0 1.0
HB2 A:TYR910 3.6 0.0 1.0
HB3 A:CYS921 3.6 0.0 1.0
H A:GLY918 3.7 0.0 1.0
HB3 A:CYS915 3.8 0.0 1.0
HB2 A:ARG909 3.8 0.0 1.0
HD3 A:ARG909 3.9 0.0 1.0
HD2 A:PRO916 4.0 0.0 1.0
H A:TYR910 4.0 0.0 1.0
CB A:GLU917 4.2 0.0 1.0
HG3 A:GLU917 4.3 0.0 1.0
H A:GLU917 4.3 0.0 1.0
H A:PHE923 4.4 0.0 1.0
CG A:HIS925 4.4 0.0 1.0
ND1 A:HIS925 4.4 0.0 1.0
HB3 A:TYR910 4.5 0.0 1.0
HD2 A:PHE923 4.5 0.0 1.0
CB A:TYR910 4.5 0.0 1.0
HG2 A:GLU917 4.5 0.0 1.0
CG A:GLU917 4.6 0.0 1.0
CB A:PHE923 4.6 0.0 1.0
N A:GLY918 4.6 0.0 1.0
CA A:CYS915 4.7 0.0 1.0
CA A:CYS907 4.7 0.0 1.0
N A:TYR910 4.8 0.0 1.0
HB3 A:GLU917 4.8 0.0 1.0
CA A:CYS921 4.8 0.0 1.0
O A:PHE923 4.8 0.0 1.0
HA A:CYS915 4.8 0.0 1.0
HB3 A:PHE923 4.9 0.0 1.0
CB A:ARG909 4.9 0.0 1.0
HA A:CYS907 4.9 0.0 1.0
N A:GLU917 4.9 0.0 1.0
HA A:CYS921 5.0 0.0 1.0
CD A:PRO916 5.0 0.0 1.0

Reference:

C.Abe, Y.Muto, M.Inoue, T.Kigawa, T.Terada, M.Shirouzu, S.Yokoyama. Solution Structure of Ccch Type Zinc-Finger Domain 3 in Zinc Finger Ccch-Type Domain Containing 7A To Be Published.
Page generated: Wed Dec 16 03:20:53 2020

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