Zinc in PDB 2d9l: Solution Structure of the Arfgap Domain of Human Rip

The binding sites of Zinc atom in the Solution Structure of the Arfgap Domain of Human Rip (pdb code 2d9l). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Solution Structure of the Arfgap Domain of Human Rip, PDB code: 2d9l:

Zinc binding site 1 out of 1 in the Solution Structure of the Arfgap Domain of Human Rip


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Arfgap Domain of Human Rip within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:0.0 occ:1.00 SG A:CYS46 2.3 0.0 1.0 SG A:CYS26 2.3 0.0 1.0 SG A:CYS43 2.3 0.0 1.0 SG A:CYS23 2.3 0.0 1.0 H A:CYS26 3.0 0.0 1.0 H A:CYS43 3.2 0.0 1.0 HB2 A:CYS46 3.2 0.0 1.0 H A:CYS46 3.3 0.0 1.0 CB A:CYS23 3.3 0.0 1.0 HB3 A:CYS23 3.3 0.0 1.0 HB2 A:CYS23 3.4 0.0 1.0 CB A:CYS46 3.4 0.0 1.0 HB3 A:CYS43 3.5 0.0 1.0 HB3 A:CYS26 3.5 0.0 1.0 CB A:CYS43 3.5 0.0 1.0 CB A:CYS26 3.6 0.0 1.0 N A:CYS26 3.9 0.0 1.0 N A:CYS43 3.9 0.0 1.0 HB2 A:SER45 3.9 0.0 1.0 HB2 A:ASP25 3.9 0.0 1.0 H A:ASP25 4.0 0.0 1.0 N A:CYS46 4.1 0.0 1.0 H A:GLN28 4.2 0.0 1.0 HB3 A:CYS46 4.2 0.0 1.0 HB3 A:GLN28 4.2 0.0 1.0 CA A:CYS43 4.3 0.0 1.0 HB A:VAL42 4.3 0.0 1.0 CA A:CYS26 4.3 0.0 1.0 CA A:CYS46 4.4 0.0 1.0 HB2 A:CYS26 4.4 0.0 1.0 HB2 A:CYS43 4.4 0.0 1.0 H A:PHE24 4.4 0.0 1.0 HA A:VAL42 4.5 0.0 1.0 HB2 A:GLN28 4.5 0.0 1.0 H A:ASP27 4.6 0.0 1.0 OD2 A:ASP25 4.8 0.0 1.0 CA A:CYS23 4.8 0.0 1.0 CB A:ASP25 4.8 0.0 1.0 HA A:CYS46 4.8 0.0 1.0 N A:ASP25 4.8 0.0 1.0 C A:VAL42 4.8 0.0 1.0 CB A:SER45 4.9 0.0 1.0 CB A:GLN28 4.9 0.0 1.0 C A:CYS43 4.9 0.0 1.0 C A:CYS26 4.9 0.0 1.0 HB3 A:SER45 4.9 0.0 1.0 C A:ASP25 5.0 0.0 1.0 N A:ASP27 5.0 0.0 1.0 CG A:ASP25 5.0 0.0 1.0 H A:SER45 5.0 0.0 1.0

T.Suetake, F.Hayashi, S.Yokoyama. Solution Structure of the Arfgap Domain of Human Rip To Be Published.