Zinc in PDB 2d8v: Solution Structure of the B-Box Domain of the Zinc Finger Fyve Domain-Containing Protein 19 From Mus Musculus

The binding sites of Zinc atom in the Solution Structure of the B-Box Domain of the Zinc Finger Fyve Domain-Containing Protein 19 From Mus Musculus (pdb code 2d8v). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the B-Box Domain of the Zinc Finger Fyve Domain-Containing Protein 19 From Mus Musculus, PDB code: 2d8v:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Solution Structure of the B-Box Domain of the Zinc Finger Fyve Domain-Containing Protein 19 From Mus Musculus


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the B-Box Domain of the Zinc Finger Fyve Domain-Containing Protein 19 From Mus Musculus within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:0.0 occ:1.00 SG A:CYS14 2.3 0.0 1.0 SG A:CYS34 2.3 0.0 1.0 SG A:CYS31 2.3 0.0 1.0 SG A:CYS11 2.4 0.0 1.0 HB A:ILE13 2.6 0.0 1.0 H A:CYS14 2.6 0.0 1.0 HB2 A:CYS34 2.9 0.0 1.0 HB3 A:CYS11 3.1 0.0 1.0 CB A:CYS11 3.2 0.0 1.0 CB A:CYS34 3.2 0.0 1.0 HB3 A:CYS31 3.4 0.0 1.0 HB2 A:CYS11 3.4 0.0 1.0 H A:CYS34 3.5 0.0 1.0 N A:CYS14 3.5 0.0 1.0 CB A:CYS14 3.5 0.0 1.0 CB A:CYS31 3.5 0.0 1.0 HB3 A:CYS14 3.5 0.0 1.0 CB A:ILE13 3.7 0.0 1.0 H A:CYS31 3.8 0.0 1.0 HB3 A:CYS34 3.9 0.0 1.0 HG23 A:ILE13 3.9 0.0 1.0 H A:ILE13 4.0 0.0 1.0 CA A:CYS14 4.1 0.0 1.0 H A:ASN15 4.1 0.0 1.0 HG13 A:ILE13 4.2 0.0 1.0 HB2 A:CYS31 4.2 0.0 1.0 CG2 A:ILE13 4.2 0.0 1.0 N A:CYS34 4.2 0.0 1.0 HG22 A:ILE13 4.2 0.0 1.0 HD2 A:ARG33 4.3 0.0 1.0 HB3 A:ARG33 4.3 0.0 1.0 HG2 A:GLU16 4.3 0.0 1.0 CA A:CYS34 4.4 0.0 1.0 HB2 A:CYS14 4.4 0.0 1.0 N A:CYS31 4.4 0.0 1.0 C A:ILE13 4.4 0.0 1.0 CA A:ILE13 4.5 0.0 1.0 CG1 A:ILE13 4.5 0.0 1.0 CA A:CYS31 4.6 0.0 1.0 N A:ILE13 4.7 0.0 1.0 CA A:CYS11 4.7 0.0 1.0 HD1 A:TYR30 4.7 0.0 1.0 H A:GLU16 4.8 0.0 1.0 OE1 A:GLU16 4.8 0.0 1.0 HG12 A:ILE13 4.8 0.0 1.0 N A:ASN15 4.9 0.0 1.0 H A:ARG33 4.9 0.0 1.0 HA A:CYS14 4.9 0.0 1.0 HA A:CYS34 5.0 0.0 1.0 H A:PHE35 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the Solution Structure of the B-Box Domain of the Zinc Finger Fyve Domain-Containing Protein 19 From Mus Musculus


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the B-Box Domain of the Zinc Finger Fyve Domain-Containing Protein 19 From Mus Musculus within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:0.0 occ:1.00 NE2 A:HIS39 2.3 0.0 1.0 SG A:CYS22 2.3 0.0 1.0 ND1 A:HIS47 2.4 0.0 1.0 SG A:CYS25 2.4 0.0 1.0 HB2 A:CYS25 2.9 0.0 1.0 HE1 A:HIS47 3.0 0.0 1.0 CD2 A:HIS39 3.0 0.0 1.0 CE1 A:HIS47 3.1 0.0 1.0 HD2 A:HIS39 3.1 0.0 1.0 CB A:CYS25 3.2 0.0 1.0 CE1 A:HIS39 3.4 0.0 1.0 HB3 A:HIS47 3.4 0.0 1.0 CB A:CYS22 3.5 0.0 1.0 CG A:HIS47 3.5 0.0 1.0 HB3 A:CYS22 3.6 0.0 1.0 HB2 A:CYS22 3.7 0.0 1.0 HE1 A:HIS39 3.8 0.0 1.0 H A:CYS25 3.8 0.0 1.0 N A:CYS25 3.9 0.0 1.0 CB A:HIS47 4.1 0.0 1.0 HB3 A:CYS25 4.1 0.0 1.0 CA A:CYS25 4.1 0.0 1.0 HE2 A:TYR30 4.2 0.0 1.0 CG A:HIS39 4.3 0.0 1.0 NE2 A:HIS47 4.3 0.0 1.0 HE1 A:PHE35 4.3 0.0 1.0 HD12 A:LEU44 4.4 0.0 1.0 HA A:CYS25 4.4 0.0 1.0 ND1 A:HIS39 4.4 0.0 1.0 CD2 A:HIS47 4.5 0.0 1.0 C A:GLY24 4.5 0.0 1.0 HB2 A:HIS47 4.6 0.0 1.0 HA3 A:GLY24 4.6 0.0 1.0 HH A:TYR30 4.8 0.0 1.0 HD13 A:LEU44 4.8 0.0 1.0 H A:GLY24 4.8 0.0 1.0 CE2 A:TYR30 4.8 0.0 1.0 CA A:CYS22 4.9 0.0 1.0 HB2 A:ASP28 5.0 0.0 1.0

K.Miyamoto, T.Kigawa, M.Sato, S.Koshiba, M.Inoue, S.Yokoyama. Solution Structure of the B-Box Domain of the Zinc Finger Fyve Domain-Containing Protein 19 From Mus Musculus To Be Published.