Zinc in PDB 2d8q: Solution Structure of the Mynd Domain of the Human Zinc Finger Mynd Domain-Containing Protein 10

The binding sites of Zinc atom in the Solution Structure of the Mynd Domain of the Human Zinc Finger Mynd Domain-Containing Protein 10 (pdb code 2d8q). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Mynd Domain of the Human Zinc Finger Mynd Domain-Containing Protein 10, PDB code: 2d8q:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Solution Structure of the Mynd Domain of the Human Zinc Finger Mynd Domain-Containing Protein 10


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Mynd Domain of the Human Zinc Finger Mynd Domain-Containing Protein 10 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:0.0 occ:1.00 SG A:CYS42 2.3 0.0 1.0 SG A:CYS21 2.3 0.0 1.0 SG A:CYS18 2.3 0.0 1.0 SG A:CYS38 2.3 0.0 1.0 H A:CYS21 2.9 0.0 1.0 HB2 A:CYS42 3.1 0.0 1.0 H A:CYS38 3.2 0.0 1.0 HB2 A:CYS18 3.2 0.0 1.0 CB A:CYS42 3.3 0.0 1.0 CB A:CYS18 3.3 0.0 1.0 HB3 A:CYS38 3.3 0.0 1.0 HB3 A:CYS18 3.4 0.0 1.0 HB3 A:CYS21 3.4 0.0 1.0 HB3 A:TYR20 3.5 0.0 1.0 CB A:CYS21 3.5 0.0 1.0 CB A:CYS38 3.5 0.0 1.0 HB3 A:CYS42 3.5 0.0 1.0 N A:CYS21 3.7 0.0 1.0 H A:CYS39 3.8 0.0 1.0 H A:ALA23 3.9 0.0 1.0 HB3 A:ALA23 4.0 0.0 1.0 H A:TYR20 4.0 0.0 1.0 N A:CYS38 4.1 0.0 1.0 CA A:CYS21 4.1 0.0 1.0 HB2 A:CYS38 4.3 0.0 1.0 CA A:CYS38 4.4 0.0 1.0 HB2 A:CYS21 4.4 0.0 1.0 HD1 A:TYR37 4.5 0.0 1.0 CB A:TYR20 4.5 0.0 1.0 H A:CYS42 4.6 0.0 1.0 H A:SER22 4.6 0.0 1.0 N A:CYS39 4.6 0.0 1.0 C A:CYS21 4.6 0.0 1.0 CA A:CYS42 4.7 0.0 1.0 CA A:CYS18 4.7 0.0 1.0 HB2 A:ALA23 4.7 0.0 1.0 C A:TYR20 4.7 0.0 1.0 H A:ALA19 4.8 0.0 1.0 CB A:ALA23 4.8 0.0 1.0 N A:TYR20 4.8 0.0 1.0 HB2 A:TYR20 4.8 0.0 1.0 N A:SER22 4.8 0.0 1.0 HA A:TYR37 4.8 0.0 1.0 N A:ALA23 4.8 0.0 1.0 HB3 A:TYR37 4.9 0.0 1.0 CA A:TYR20 4.9 0.0 1.0 HA A:CYS18 4.9 0.0 1.0

Zinc binding site 2 out of 2 in the Solution Structure of the Mynd Domain of the Human Zinc Finger Mynd Domain-Containing Protein 10


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Mynd Domain of the Human Zinc Finger Mynd Domain-Containing Protein 10 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:0.0 occ:1.00 SG A:CYS29 2.3 0.0 1.0 SG A:CYS32 2.4 0.0 1.0 NE2 A:HIS50 2.4 0.0 1.0 SG A:CYS54 2.4 0.0 1.0 HB3 A:ARG31 3.0 0.0 1.0 HB2 A:CYS54 3.0 0.0 1.0 CE1 A:HIS50 3.1 0.0 1.0 HE1 A:HIS50 3.1 0.0 1.0 H A:CYS32 3.1 0.0 1.0 HB3 A:CYS29 3.2 0.0 1.0 CB A:CYS54 3.3 0.0 1.0 CB A:CYS29 3.3 0.0 1.0 HB3 A:CYS32 3.3 0.0 1.0 HB2 A:CYS29 3.4 0.0 1.0 CB A:CYS32 3.4 0.0 1.0 CD2 A:HIS50 3.5 0.0 1.0 HA A:CYS54 3.6 0.0 1.0 N A:CYS32 3.7 0.0 1.0 HD2 A:HIS50 3.8 0.0 1.0 H A:GLN33 4.0 0.0 1.0 CA A:CYS54 4.0 0.0 1.0 CB A:ARG31 4.0 0.0 1.0 CA A:CYS32 4.1 0.0 1.0 HB3 A:CYS54 4.1 0.0 1.0 H A:ARG31 4.3 0.0 1.0 HB2 A:GLU35 4.3 0.0 1.0 H A:ASN34 4.3 0.0 1.0 ND1 A:HIS50 4.3 0.0 1.0 HB2 A:CYS32 4.3 0.0 1.0 HB2 A:ARG31 4.3 0.0 1.0 C A:ARG31 4.5 0.0 1.0 CG A:HIS50 4.5 0.0 1.0 N A:GLN33 4.7 0.0 1.0 HB3 A:GLU35 4.7 0.0 1.0 HG2 A:ARG31 4.7 0.0 1.0 CA A:ARG31 4.7 0.0 1.0 CA A:CYS29 4.7 0.0 1.0 N A:ARG31 4.8 0.0 1.0 H A:VAL55 4.9 0.0 1.0 C A:CYS32 4.9 0.0 1.0 N A:CYS54 4.9 0.0 1.0 HE21 A:GLN43 5.0 0.0 1.0 CG A:ARG31 5.0 0.0 1.0 CB A:GLU35 5.0 0.0 1.0

K.Miyamoto, T.Kigawa, T.Tomizawa, N.Tochio, A.Sasagawa, S.Koshiba, M.Inoue, S.Yokoyama. Solution Structure of the Mynd Domain of the Human Zinc Finger Mynd Domain-Containing Protein 10 To Be Published.