Atomistry » Zinc » PDB 2aqq-2b63 » 2b10
Atomistry »
  Zinc »
    PDB 2aqq-2b63 »
      2b10 »

Zinc in PDB 2b10: Crystal Structure of the Protein-Protein Complex Between F82S Cytochrome C and Cytochrome C Peroxidase

Enzymatic activity of Crystal Structure of the Protein-Protein Complex Between F82S Cytochrome C and Cytochrome C Peroxidase

All present enzymatic activity of Crystal Structure of the Protein-Protein Complex Between F82S Cytochrome C and Cytochrome C Peroxidase:
1.11.1.5;

Protein crystallography data

The structure of Crystal Structure of the Protein-Protein Complex Between F82S Cytochrome C and Cytochrome C Peroxidase, PDB code: 2b10 was solved by S.A.Kang, B.R.Crane, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.80
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 44.575, 113.448, 88.002, 90.00, 104.55, 90.00
R / Rfree (%) 28.4 / 30.6

Other elements in 2b10:

The structure of Crystal Structure of the Protein-Protein Complex Between F82S Cytochrome C and Cytochrome C Peroxidase also contains other interesting chemical elements:

Iron (Fe) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of the Protein-Protein Complex Between F82S Cytochrome C and Cytochrome C Peroxidase (pdb code 2b10). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of the Protein-Protein Complex Between F82S Cytochrome C and Cytochrome C Peroxidase, PDB code: 2b10:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2b10

Go back to Zinc Binding Sites List in 2b10
Zinc binding site 1 out of 2 in the Crystal Structure of the Protein-Protein Complex Between F82S Cytochrome C and Cytochrome C Peroxidase


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Protein-Protein Complex Between F82S Cytochrome C and Cytochrome C Peroxidase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn295

b:13.2
occ:1.00
ZN A:ZNH295 0.0 13.2 1.0
ND A:ZNH295 2.0 12.5 1.0
NB A:ZNH295 2.0 15.4 1.0
NA A:ZNH295 2.1 18.9 1.0
NE2 A:HIS175 2.1 21.3 1.0
NC A:ZNH295 2.1 16.8 1.0
C4D A:ZNH295 3.0 12.9 1.0
C1D A:ZNH295 3.0 11.1 1.0
CD2 A:HIS175 3.0 16.4 1.0
C1B A:ZNH295 3.0 8.8 1.0
C1A A:ZNH295 3.1 19.9 1.0
C4C A:ZNH295 3.1 18.1 1.0
C4B A:ZNH295 3.1 7.2 1.0
C4A A:ZNH295 3.1 14.7 1.0
CE1 A:HIS175 3.1 27.4 1.0
C1C A:ZNH295 3.1 15.3 1.0
CHA A:ZNH295 3.3 15.6 1.0
CHD A:ZNH295 3.4 8.1 1.0
CHB A:ZNH295 3.4 14.0 1.0
CHC A:ZNH295 3.4 14.4 1.0
CG A:HIS175 4.2 17.5 1.0
ND1 A:HIS175 4.2 21.7 1.0
C2D A:ZNH295 4.3 6.9 1.0
C2A A:ZNH295 4.3 15.0 1.0
C3D A:ZNH295 4.3 13.9 1.0
C3A A:ZNH295 4.3 19.4 1.0
C2B A:ZNH295 4.3 10.6 1.0
C2C A:ZNH295 4.3 16.2 1.0
C3C A:ZNH295 4.3 19.3 1.0
C3B A:ZNH295 4.4 9.2 1.0
NE1 A:TRP51 4.4 8.0 1.0
CD1 A:TRP51 4.8 14.1 1.0
CH2 A:TRP191 4.9 9.2 1.0
CZ2 A:TRP191 4.9 6.1 1.0

Zinc binding site 2 out of 2 in 2b10

Go back to Zinc Binding Sites List in 2b10
Zinc binding site 2 out of 2 in the Crystal Structure of the Protein-Protein Complex Between F82S Cytochrome C and Cytochrome C Peroxidase


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of the Protein-Protein Complex Between F82S Cytochrome C and Cytochrome C Peroxidase within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn795

b:11.6
occ:1.00
ZN C:ZNH795 0.0 11.6 1.0
ND C:ZNH795 2.0 12.4 1.0
NC C:ZNH795 2.0 12.2 1.0
NB C:ZNH795 2.1 18.3 1.0
NA C:ZNH795 2.1 18.2 1.0
NE2 C:HIS175 2.2 15.2 1.0
CD2 C:HIS175 3.0 15.5 1.0
C1D C:ZNH795 3.0 3.2 1.0
C4C C:ZNH795 3.0 17.1 1.0
C1C C:ZNH795 3.0 13.3 1.0
C4D C:ZNH795 3.1 11.5 1.0
C4B C:ZNH795 3.1 15.1 1.0
C1A C:ZNH795 3.1 15.7 1.0
C1B C:ZNH795 3.1 19.4 1.0
C4A C:ZNH795 3.2 19.4 1.0
CE1 C:HIS175 3.3 19.5 1.0
CHD C:ZNH795 3.3 2.9 1.0
CHC C:ZNH795 3.4 17.1 1.0
CHA C:ZNH795 3.4 10.2 1.0
CHB C:ZNH795 3.5 18.6 1.0
NE1 C:TRP51 4.2 8.4 1.0
CG C:HIS175 4.2 18.2 1.0
C2D C:ZNH795 4.3 3.9 1.0
C2A C:ZNH795 4.3 20.4 1.0
ND1 C:HIS175 4.3 16.6 1.0
C3D C:ZNH795 4.3 5.4 1.0
C2C C:ZNH795 4.3 10.0 1.0
C3A C:ZNH795 4.3 21.7 1.0
C3C C:ZNH795 4.4 15.1 1.0
C2B C:ZNH795 4.4 16.7 1.0
C3B C:ZNH795 4.4 21.9 1.0
CD1 C:TRP51 4.7 9.6 1.0
CH2 C:TRP191 4.9 29.5 1.0

Reference:

S.A.Kang, B.R.Crane. Effects of Interface Mutations on Association Modes and Electron-Transfer Rates Between Proteins Proc.Natl.Acad.Sci.Usa V. 102 15465 2005.
ISSN: ISSN 0027-8424
PubMed: 16227441
DOI: 10.1073/PNAS.0505176102
Page generated: Wed Oct 16 21:52:51 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy