Zinc in PDB 2alc: Ethanol Regulon Transcriptional Activator Dna-Binding Domain From Aspergillus Nidulans
Zinc Binding Sites:
The binding sites of Zinc atom in the Ethanol Regulon Transcriptional Activator Dna-Binding Domain From Aspergillus Nidulans
(pdb code 2alc). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Ethanol Regulon Transcriptional Activator Dna-Binding Domain From Aspergillus Nidulans, PDB code: 2alc:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 2alc
Go back to
Zinc Binding Sites List in 2alc
Zinc binding site 1 out
of 2 in the Ethanol Regulon Transcriptional Activator Dna-Binding Domain From Aspergillus Nidulans
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Ethanol Regulon Transcriptional Activator Dna-Binding Domain From Aspergillus Nidulans within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn64
b:0.6
occ:1.00
|
SG
|
A:CYS15
|
2.3
|
0.2
|
1.0
|
SG
|
A:CYS22
|
2.3
|
0.2
|
1.0
|
SG
|
A:CYS39
|
2.4
|
0.1
|
1.0
|
SG
|
A:CYS12
|
2.4
|
0.1
|
1.0
|
HD21
|
A:ASN41
|
2.9
|
0.1
|
1.0
|
HB2
|
A:CYS15
|
2.9
|
0.1
|
1.0
|
H
|
A:CYS12
|
3.0
|
0.1
|
1.0
|
HB2
|
A:ASN41
|
3.0
|
0.1
|
1.0
|
HB3
|
A:CYS22
|
3.0
|
0.2
|
1.0
|
ZN
|
A:ZN65
|
3.1
|
1.0
|
1.0
|
CB
|
A:CYS15
|
3.2
|
0.2
|
1.0
|
CB
|
A:CYS22
|
3.2
|
0.1
|
1.0
|
CB
|
A:CYS39
|
3.3
|
0.1
|
1.0
|
HB3
|
A:CYS39
|
3.3
|
0.1
|
1.0
|
HB2
|
A:CYS39
|
3.4
|
0.1
|
1.0
|
HB3
|
A:CYS12
|
3.5
|
0.1
|
1.0
|
CB
|
A:CYS12
|
3.6
|
0.1
|
1.0
|
H
|
A:CYS15
|
3.6
|
0.1
|
1.0
|
HB2
|
A:CYS22
|
3.6
|
0.2
|
1.0
|
HG2
|
A:PRO14
|
3.6
|
0.1
|
1.0
|
N
|
A:CYS12
|
3.6
|
0.1
|
1.0
|
ND2
|
A:ASN41
|
3.8
|
0.1
|
1.0
|
HB3
|
A:CYS15
|
3.8
|
0.2
|
1.0
|
HB3
|
A:SER11
|
4.0
|
0.6
|
1.0
|
CB
|
A:ASN41
|
4.0
|
0.1
|
1.0
|
CA
|
A:CYS12
|
4.1
|
0.1
|
1.0
|
H
|
A:CYS42
|
4.1
|
0.1
|
1.0
|
N
|
A:CYS15
|
4.2
|
0.2
|
1.0
|
HA
|
A:SER11
|
4.3
|
0.2
|
1.0
|
O
|
A:CYS12
|
4.3
|
0.2
|
1.0
|
CA
|
A:CYS15
|
4.3
|
0.2
|
1.0
|
H
|
A:ASN41
|
4.4
|
0.2
|
1.0
|
HB2
|
A:ALA24
|
4.4
|
1.0
|
1.0
|
HB3
|
A:ASN41
|
4.4
|
0.2
|
1.0
|
CG
|
A:ASN41
|
4.4
|
0.2
|
1.0
|
HD22
|
A:ASN41
|
4.4
|
0.1
|
1.0
|
HB2
|
A:CYS12
|
4.5
|
0.1
|
1.0
|
C
|
A:CYS12
|
4.5
|
0.2
|
1.0
|
C
|
A:SER11
|
4.6
|
0.2
|
1.0
|
HB3
|
A:ALA24
|
4.6
|
1.0
|
1.0
|
HD2
|
A:PRO14
|
4.6
|
0.1
|
1.0
|
CA
|
A:CYS22
|
4.6
|
0.1
|
1.0
|
H
|
A:CYS22
|
4.7
|
0.1
|
1.0
|
CG
|
A:PRO14
|
4.7
|
0.2
|
1.0
|
CB
|
A:SER11
|
4.7
|
0.2
|
1.0
|
HB2
|
A:SER11
|
4.7
|
0.8
|
1.0
|
CA
|
A:CYS39
|
4.7
|
0.2
|
1.0
|
CA
|
A:SER11
|
4.7
|
0.2
|
1.0
|
H
|
A:CYS39
|
4.7
|
0.2
|
1.0
|
SG
|
A:CYS42
|
4.8
|
0.2
|
1.0
|
N
|
A:CYS22
|
4.8
|
0.1
|
1.0
|
HA
|
A:CYS15
|
4.9
|
0.2
|
1.0
|
H
|
A:ARG16
|
4.9
|
0.2
|
1.0
|
SG
|
A:CYS49
|
4.9
|
0.2
|
1.0
|
N
|
A:CYS42
|
5.0
|
0.1
|
1.0
|
CB
|
A:ALA24
|
5.0
|
0.2
|
1.0
|
|
Zinc binding site 2 out
of 2 in 2alc
Go back to
Zinc Binding Sites List in 2alc
Zinc binding site 2 out
of 2 in the Ethanol Regulon Transcriptional Activator Dna-Binding Domain From Aspergillus Nidulans
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Ethanol Regulon Transcriptional Activator Dna-Binding Domain From Aspergillus Nidulans within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn65
b:1.0
occ:1.00
|
SG
|
A:CYS42
|
2.3
|
0.2
|
1.0
|
SG
|
A:CYS49
|
2.3
|
0.2
|
1.0
|
SG
|
A:CYS12
|
2.4
|
0.1
|
1.0
|
SG
|
A:CYS39
|
2.4
|
0.1
|
1.0
|
HA
|
A:CYS49
|
2.6
|
0.2
|
1.0
|
H
|
A:CYS39
|
2.9
|
0.2
|
1.0
|
HB2
|
A:CYS42
|
3.0
|
0.2
|
1.0
|
ZN
|
A:ZN64
|
3.1
|
0.6
|
1.0
|
HB3
|
A:CYS12
|
3.3
|
0.1
|
1.0
|
CB
|
A:CYS49
|
3.3
|
0.2
|
1.0
|
CB
|
A:CYS42
|
3.3
|
0.2
|
1.0
|
CB
|
A:CYS12
|
3.3
|
0.1
|
1.0
|
H
|
A:CYS42
|
3.3
|
0.1
|
1.0
|
CA
|
A:CYS49
|
3.4
|
0.2
|
1.0
|
HG2
|
A:PRO14
|
3.4
|
0.1
|
1.0
|
HB3
|
A:CYS39
|
3.4
|
0.1
|
1.0
|
HB2
|
A:CYS49
|
3.4
|
0.2
|
1.0
|
CB
|
A:CYS39
|
3.5
|
0.1
|
1.0
|
HB2
|
A:CYS12
|
3.5
|
0.1
|
1.0
|
N
|
A:CYS39
|
3.7
|
0.2
|
1.0
|
HG3
|
A:PRO14
|
3.9
|
0.2
|
1.0
|
N
|
A:CYS49
|
4.0
|
0.2
|
1.0
|
HB3
|
A:CYS42
|
4.0
|
0.2
|
1.0
|
N
|
A:CYS42
|
4.0
|
0.1
|
1.0
|
CG
|
A:PRO14
|
4.0
|
0.2
|
1.0
|
HD2
|
A:PRO14
|
4.1
|
0.1
|
1.0
|
CA
|
A:CYS39
|
4.1
|
0.2
|
1.0
|
HB2
|
A:ASN41
|
4.1
|
0.1
|
1.0
|
HB2
|
A:SER38
|
4.2
|
0.7
|
1.0
|
CA
|
A:CYS42
|
4.2
|
0.1
|
1.0
|
HB3
|
A:CYS49
|
4.3
|
0.2
|
1.0
|
HB2
|
A:CYS39
|
4.4
|
0.1
|
1.0
|
HH2
|
A:TRP36
|
4.4
|
0.3
|
1.0
|
HA
|
A:SER38
|
4.4
|
0.3
|
1.0
|
H
|
A:CYS49
|
4.4
|
0.2
|
1.0
|
H
|
A:THR50
|
4.5
|
0.2
|
1.0
|
O
|
A:CYS39
|
4.5
|
0.2
|
1.0
|
HB3
|
A:ALA24
|
4.5
|
1.0
|
1.0
|
H
|
A:CYS12
|
4.6
|
0.1
|
1.0
|
C
|
A:ASP48
|
4.6
|
0.2
|
1.0
|
HA
|
A:CYS42
|
4.6
|
0.2
|
1.0
|
CD
|
A:PRO14
|
4.6
|
0.2
|
1.0
|
C
|
A:CYS49
|
4.6
|
0.2
|
1.0
|
O
|
A:ASP48
|
4.7
|
0.3
|
1.0
|
C
|
A:CYS39
|
4.7
|
0.2
|
1.0
|
CA
|
A:CYS12
|
4.7
|
0.1
|
1.0
|
HZ2
|
A:TRP36
|
4.7
|
0.3
|
1.0
|
C
|
A:SER38
|
4.7
|
0.3
|
1.0
|
SG
|
A:CYS15
|
4.7
|
0.2
|
1.0
|
CB
|
A:SER38
|
4.8
|
0.2
|
1.0
|
CA
|
A:SER38
|
4.9
|
0.3
|
1.0
|
HB3
|
A:SER38
|
4.9
|
0.6
|
1.0
|
HB2
|
A:LYS47
|
4.9
|
0.2
|
1.0
|
N
|
A:THR50
|
5.0
|
0.2
|
1.0
|
SG
|
A:CYS22
|
5.0
|
0.2
|
1.0
|
|
Reference:
R.Cerdan,
B.Cahuzac,
B.Felenbok,
E.Guittet.
uc(Nmr) Solution Structure of Alcr (1-60) Provides Insight in the Unusual Dna Binding Properties of This Zinc Binuclear Cluster Protein. J.Mol.Biol. V. 295 729 2000.
ISSN: ISSN 0022-2836
PubMed: 10656785
DOI: 10.1006/JMBI.1999.3417
Page generated: Wed Oct 16 21:41:13 2024
|