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Zinc in PDB 1zfd: SWI5 Zinc Finger Domain 2, uc(Nmr), 45 Structures

Zinc Binding Sites:

The binding sites of Zinc atom in the SWI5 Zinc Finger Domain 2, uc(Nmr), 45 Structures (pdb code 1zfd). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the SWI5 Zinc Finger Domain 2, uc(Nmr), 45 Structures, PDB code: 1zfd:

Zinc binding site 1 out of 1 in 1zfd

Go back to Zinc Binding Sites List in 1zfd
Zinc binding site 1 out of 1 in the SWI5 Zinc Finger Domain 2, uc(Nmr), 45 Structures


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of SWI5 Zinc Finger Domain 2, uc(Nmr), 45 Structures within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn71

b:0.0
occ:1.00
NE2 A:HIS62 2.0 0.0 1.0
NE2 A:HIS66 2.0 0.0 1.0
SG A:CYS44 2.3 0.0 1.0
SG A:CYS49 2.3 0.0 1.0
CD2 A:HIS66 2.9 0.0 1.0
HB3 A:HIS46 3.0 0.0 1.0
CE1 A:HIS62 3.0 0.0 1.0
CD2 A:HIS62 3.0 0.0 1.0
HB3 A:CYS44 3.0 0.0 1.0
HB2 A:CYS49 3.1 0.0 1.0
CE1 A:HIS66 3.1 0.0 1.0
HD2 A:HIS66 3.1 0.0 1.0
HE1 A:HIS62 3.3 0.0 1.0
CB A:CYS44 3.3 0.0 1.0
HD2 A:HIS62 3.3 0.0 1.0
CB A:CYS49 3.3 0.0 1.0
HE1 A:HIS66 3.4 0.0 1.0
H A:HIS46 3.5 0.0 1.0
HB2 A:CYS44 3.8 0.0 1.0
CB A:HIS46 4.0 0.0 1.0
HB3 A:CYS49 4.0 0.0 1.0
ND1 A:HIS62 4.1 0.0 1.0
ND1 A:HIS66 4.1 0.0 1.0
CG A:HIS66 4.1 0.0 1.0
HB2 A:HIS46 4.2 0.0 1.0
CG A:HIS62 4.2 0.0 1.0
HA A:CYS49 4.3 0.0 1.0
HE2 A:PHE53 4.4 0.0 1.0
N A:HIS46 4.4 0.0 1.0
CA A:CYS49 4.4 0.0 1.0
H A:ASP50 4.5 0.0 1.0
HA A:LYS63 4.5 0.0 1.0
CA A:CYS44 4.6 0.0 1.0
C A:CYS44 4.6 0.0 1.0
H A:LYS51 4.7 0.0 1.0
O A:CYS44 4.8 0.0 1.0
CA A:HIS46 4.9 0.0 1.0
HB2 A:LYS51 4.9 0.0 1.0
HD2 A:HIS46 4.9 0.0 1.0
CG A:HIS46 4.9 0.0 1.0
HD1 A:HIS62 5.0 0.0 1.0
N A:ASP45 5.0 0.0 1.0

Reference:

D.Neuhaus, Y.Nakaseko, J.W.Schwabe, A.Klug. Solution Structures of Two Zinc-Finger Domains From SWI5 Obtained Using Two-Dimensional 1H Nuclear Magnetic Resonance Spectroscopy. A Zinc-Finger Structure with A Third Strand of Beta-Sheet. J.Mol.Biol. V. 228 637 1992.
ISSN: ISSN 0022-2836
PubMed: 1453468
DOI: 10.1016/0022-2836(92)90846-C
Page generated: Wed Aug 20 00:52:45 2025

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