Zinc in PDB 1xwy: Crystal Structure of Tatd Deoxyribonuclease From Escherichia Coli K12 at 2.0 A Resolution

The structure of Crystal Structure of Tatd Deoxyribonuclease From Escherichia Coli K12 at 2.0 A Resolution, PDB code: 1xwy was solved by V.N.Malashkevich, D.F.Xiang, F.M.Raushel, S.C.Almo, S.K.Burley, New Yorksgx Research Center For Structural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.93 / 2.00
Space group	P 41
Cell size a, b, c (Å), α, β, γ (°)	73.885, 73.885, 67.824, 90.00, 90.00, 90.00
R / Rfree (%)	17.1 / 21.6

The binding sites of Zinc atom in the Crystal Structure of Tatd Deoxyribonuclease From Escherichia Coli K12 at 2.0 A Resolution (pdb code 1xwy). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Tatd Deoxyribonuclease From Escherichia Coli K12 at 2.0 A Resolution, PDB code: 1xwy:

Zinc binding site 1 out of 1 in the Crystal Structure of Tatd Deoxyribonuclease From Escherichia Coli K12 at 2.0 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Tatd Deoxyribonuclease From Escherichia Coli K12 at 2.0 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:31.2 occ:1.00 OE1 A:GLU201 2.0 23.2 1.0 O A:HOH505 2.1 20.7 1.0 ND1 A:HIS152 2.2 24.0 1.0 SG A:CYS153 2.5 28.5 1.0 CD A:GLU201 2.9 25.1 1.0 CE1 A:HIS152 3.0 26.6 1.0 OE2 A:GLU201 3.2 24.8 1.0 CG A:HIS152 3.2 25.4 1.0 CB A:CYS153 3.4 22.3 1.0 N A:CYS153 3.4 21.4 1.0 CB A:HIS152 3.6 23.9 1.0 CA A:CYS153 3.8 23.8 1.0 OD1 A:ASP203 4.0 27.5 1.0 C A:HIS152 4.1 23.6 1.0 O A:HOH447 4.1 32.4 1.0 NE2 A:HIS152 4.1 25.8 1.0 CG A:GLU201 4.2 24.5 1.0 CG2 A:THR174 4.2 25.1 1.0 CD2 A:HIS152 4.3 26.0 1.0 CB A:ASP203 4.4 23.5 1.0 CA A:HIS152 4.4 23.4 1.0 CG A:ASP203 4.5 27.4 1.0 CB A:GLU201 4.6 22.9 1.0 CA A:GLY5 4.7 22.6 1.0 CA A:ASP203 4.8 23.6 1.0 O A:HIS152 4.9 23.9 1.0 CZ A:PHE125 5.0 24.0 1.0

V.N.Malashkevich, D.F.Xiang, F.M.Raushel, S.C.Almo. Crystal Structure of Tatd Dnase From Escherichia Coli at 2.0 A Resolution To Be Published.