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Zinc in PDB 1x6a: Solution Structures of the Second Lim Domain of Human Lim- Kinase 2 (LIMK2)

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structures of the Second Lim Domain of Human Lim- Kinase 2 (LIMK2) (pdb code 1x6a). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structures of the Second Lim Domain of Human Lim- Kinase 2 (LIMK2), PDB code: 1x6a:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 1x6a

Go back to Zinc Binding Sites List in 1x6a
Zinc binding site 1 out of 2 in the Solution Structures of the Second Lim Domain of Human Lim- Kinase 2 (LIMK2)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structures of the Second Lim Domain of Human Lim- Kinase 2 (LIMK2) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:0.0
occ:1.00
ND1 A:HIS38 2.5 0.0 1.0
HB2 A:HIS38 2.9 0.0 1.0
HB3 A:CYS21 3.0 0.0 1.0
SG A:CYS41 3.1 0.0 1.0
SG A:CYS21 3.2 0.0 1.0
HB2 A:CYS41 3.2 0.0 1.0
HB3 A:CYS18 3.3 0.0 1.0
SG A:CYS18 3.3 0.0 1.0
CG A:HIS38 3.4 0.0 1.0
CE1 A:HIS38 3.6 0.0 1.0
CB A:CYS21 3.6 0.0 1.0
CB A:CYS41 3.6 0.0 1.0
CB A:CYS18 3.6 0.0 1.0
CB A:HIS38 3.6 0.0 1.0
HB2 A:CYS18 3.7 0.0 1.0
HE1 A:HIS38 3.9 0.0 1.0
HB3 A:CYS41 4.0 0.0 1.0
H A:HIS38 4.1 0.0 1.0
H A:CYS21 4.2 0.0 1.0
HB3 A:HIS38 4.2 0.0 1.0
HB2 A:CYS21 4.3 0.0 1.0
N A:CYS21 4.5 0.0 1.0
CD2 A:HIS38 4.6 0.0 1.0
NE2 A:HIS38 4.6 0.0 1.0
CA A:CYS21 4.7 0.0 1.0
HB2 A:GLU40 4.8 0.0 1.0
N A:HIS38 4.8 0.0 1.0
CA A:HIS38 4.8 0.0 1.0

Zinc binding site 2 out of 2 in 1x6a

Go back to Zinc Binding Sites List in 1x6a
Zinc binding site 2 out of 2 in the Solution Structures of the Second Lim Domain of Human Lim- Kinase 2 (LIMK2)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structures of the Second Lim Domain of Human Lim- Kinase 2 (LIMK2) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:0.0
occ:1.00
SG A:CYS47 3.0 0.0 1.0
SG A:CYS67 3.0 0.0 1.0
HB2 A:CYS70 3.1 0.0 1.0
HB3 A:CYS47 3.1 0.0 1.0
HB3 A:CYS67 3.1 0.0 1.0
SG A:CYS70 3.2 0.0 1.0
SG A:CYS44 3.2 0.0 1.0
HB3 A:CYS44 3.5 0.0 1.0
HB2 A:CYS44 3.5 0.0 1.0
CB A:CYS47 3.6 0.0 1.0
CB A:CYS70 3.6 0.0 1.0
CB A:CYS67 3.6 0.0 1.0
CB A:CYS44 3.6 0.0 1.0
HG12 A:VAL49 3.7 0.0 1.0
HB3 A:CYS70 4.1 0.0 1.0
H A:CYS67 4.1 0.0 1.0
HB2 A:CYS47 4.2 0.0 1.0
H A:CYS47 4.2 0.0 1.0
HG13 A:VAL49 4.2 0.0 1.0
HB2 A:CYS67 4.3 0.0 1.0
CG1 A:VAL49 4.4 0.0 1.0
H A:CYS70 4.5 0.0 1.0
N A:CYS67 4.7 0.0 1.0
CA A:CYS67 4.8 0.0 1.0
CA A:CYS47 4.8 0.0 1.0
N A:CYS47 4.8 0.0 1.0
CA A:CYS70 4.9 0.0 1.0
HB2 A:LYS69 5.0 0.0 1.0
N A:CYS70 5.0 0.0 1.0

Reference:

N.Nameki, A.Sasagawa, T.Tomizawa, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama. Solution Structures of the Second Lim Domain of Human Lim-Kinase 2 (LIMK2) To Be Published.
Page generated: Wed Dec 16 03:11:39 2020

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