Zinc in PDB 1x64: Solution Structure of the Lim Domain of Alpha-Actinin-2 Associated Lim Protein
Zinc Binding Sites:
The binding sites of Zinc atom in the Solution Structure of the Lim Domain of Alpha-Actinin-2 Associated Lim Protein
(pdb code 1x64). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Solution Structure of the Lim Domain of Alpha-Actinin-2 Associated Lim Protein, PDB code: 1x64:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 1x64
Go back to
Zinc Binding Sites List in 1x64
Zinc binding site 1 out
of 2 in the Solution Structure of the Lim Domain of Alpha-Actinin-2 Associated Lim Protein
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Solution Structure of the Lim Domain of Alpha-Actinin-2 Associated Lim Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn201
b:0.0
occ:1.00
|
ND1
|
A:HIS48
|
2.1
|
0.0
|
1.0
|
SG
|
A:CYS31
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS51
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS28
|
2.4
|
0.0
|
1.0
|
HB2
|
A:HIS48
|
2.6
|
0.0
|
1.0
|
CG
|
A:HIS48
|
3.0
|
0.0
|
1.0
|
CE1
|
A:HIS48
|
3.1
|
0.0
|
1.0
|
HB3
|
A:CYS28
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS28
|
3.2
|
0.0
|
1.0
|
H
|
A:CYS31
|
3.2
|
0.0
|
1.0
|
HB2
|
A:CYS28
|
3.3
|
0.0
|
1.0
|
CB
|
A:HIS48
|
3.3
|
0.0
|
1.0
|
HE1
|
A:HIS48
|
3.3
|
0.0
|
1.0
|
HB3
|
A:LYS30
|
3.4
|
0.0
|
1.0
|
HB2
|
A:CYS51
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS51
|
3.5
|
0.0
|
1.0
|
HB3
|
A:CYS31
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS31
|
3.5
|
0.0
|
1.0
|
H
|
A:HIS48
|
3.6
|
0.0
|
1.0
|
HB3
|
A:CYS51
|
3.8
|
0.0
|
1.0
|
HB3
|
A:HIS48
|
3.9
|
0.0
|
1.0
|
N
|
A:CYS31
|
3.9
|
0.0
|
1.0
|
CD2
|
A:HIS48
|
4.1
|
0.0
|
1.0
|
NE2
|
A:HIS48
|
4.1
|
0.0
|
1.0
|
HB2
|
A:SER33
|
4.2
|
0.0
|
1.0
|
CA
|
A:CYS31
|
4.3
|
0.0
|
1.0
|
HB2
|
A:CYS31
|
4.4
|
0.0
|
1.0
|
N
|
A:HIS48
|
4.4
|
0.0
|
1.0
|
CA
|
A:HIS48
|
4.5
|
0.0
|
1.0
|
CB
|
A:LYS30
|
4.5
|
0.0
|
1.0
|
H
|
A:SER33
|
4.5
|
0.0
|
1.0
|
HG2
|
A:LYS30
|
4.5
|
0.0
|
1.0
|
H
|
A:LYS30
|
4.6
|
0.0
|
1.0
|
H
|
A:CYS51
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS28
|
4.7
|
0.0
|
1.0
|
HG12
|
A:ILE35
|
4.8
|
0.0
|
1.0
|
CA
|
A:CYS51
|
4.8
|
0.0
|
1.0
|
C
|
A:CYS31
|
4.9
|
0.0
|
1.0
|
C
|
A:LYS30
|
4.9
|
0.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 1x64
Go back to
Zinc Binding Sites List in 1x64
Zinc binding site 2 out
of 2 in the Solution Structure of the Lim Domain of Alpha-Actinin-2 Associated Lim Protein
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Solution Structure of the Lim Domain of Alpha-Actinin-2 Associated Lim Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn401
b:0.0
occ:1.00
|
ND1
|
A:HIS78
|
2.1
|
0.0
|
1.0
|
SG
|
A:CYS57
|
2.2
|
0.0
|
1.0
|
SG
|
A:CYS75
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS54
|
2.4
|
0.0
|
1.0
|
HB2
|
A:HIS78
|
2.9
|
0.0
|
1.0
|
CE1
|
A:HIS78
|
3.0
|
0.0
|
1.0
|
H
|
A:CYS75
|
3.1
|
0.0
|
1.0
|
H
|
A:CYS57
|
3.1
|
0.0
|
1.0
|
CG
|
A:HIS78
|
3.1
|
0.0
|
1.0
|
HE1
|
A:HIS78
|
3.1
|
0.0
|
1.0
|
CB
|
A:CYS54
|
3.3
|
0.0
|
1.0
|
HB2
|
A:CYS54
|
3.3
|
0.0
|
1.0
|
HB3
|
A:ASP56
|
3.3
|
0.0
|
1.0
|
HB3
|
A:CYS54
|
3.3
|
0.0
|
1.0
|
HB3
|
A:CYS75
|
3.4
|
0.0
|
1.0
|
CB
|
A:HIS78
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS75
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS57
|
3.5
|
0.0
|
1.0
|
HB3
|
A:CYS57
|
3.5
|
0.0
|
1.0
|
H
|
A:HIS78
|
3.7
|
0.0
|
1.0
|
N
|
A:CYS57
|
3.7
|
0.0
|
1.0
|
H
|
A:ASP56
|
3.9
|
0.0
|
1.0
|
N
|
A:CYS75
|
3.9
|
0.0
|
1.0
|
HD1
|
A:TYR74
|
4.0
|
0.0
|
1.0
|
NE2
|
A:HIS78
|
4.1
|
0.0
|
1.0
|
HB2
|
A:LEU59
|
4.2
|
0.0
|
1.0
|
HB3
|
A:HIS78
|
4.2
|
0.0
|
1.0
|
CD2
|
A:HIS78
|
4.2
|
0.0
|
1.0
|
CA
|
A:CYS57
|
4.2
|
0.0
|
1.0
|
CB
|
A:ASP56
|
4.2
|
0.0
|
1.0
|
CA
|
A:CYS75
|
4.3
|
0.0
|
1.0
|
HB2
|
A:CYS75
|
4.4
|
0.0
|
1.0
|
HB2
|
A:CYS57
|
4.4
|
0.0
|
1.0
|
H
|
A:ASN58
|
4.4
|
0.0
|
1.0
|
H
|
A:LEU59
|
4.4
|
0.0
|
1.0
|
HB
|
A:THR77
|
4.4
|
0.0
|
1.0
|
HB2
|
A:ASP56
|
4.4
|
0.0
|
1.0
|
N
|
A:HIS78
|
4.5
|
0.0
|
1.0
|
HA
|
A:TYR74
|
4.5
|
0.0
|
1.0
|
C
|
A:ASP56
|
4.6
|
0.0
|
1.0
|
CA
|
A:HIS78
|
4.7
|
0.0
|
1.0
|
N
|
A:ASP56
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS54
|
4.7
|
0.0
|
1.0
|
H
|
A:ALA55
|
4.7
|
0.0
|
1.0
|
HB3
|
A:TYR74
|
4.7
|
0.0
|
1.0
|
CA
|
A:ASP56
|
4.8
|
0.0
|
1.0
|
HH21
|
A:ARG82
|
4.9
|
0.0
|
1.0
|
N
|
A:ASN58
|
4.9
|
0.0
|
1.0
|
H
|
A:ALA79
|
5.0
|
0.0
|
1.0
|
HE2
|
A:HIS78
|
5.0
|
0.0
|
1.0
|
C
|
A:CYS57
|
5.0
|
0.0
|
1.0
|
HB3
|
A:LEU59
|
5.0
|
0.0
|
1.0
|
|
Reference:
X.R.Qin,
F.Hayashi,
S.Yokoyama.
Solution Structure of the Lim Domain of Alpha-Actinin-2 Associated Lim Protein To Be Published.
Page generated: Wed Oct 16 20:17:42 2024
|