Zinc in PDB 1x4s: Solution Structure of Zinc Finger Hit Domain in Protein Fon
Zinc Binding Sites:
The binding sites of Zinc atom in the Solution Structure of Zinc Finger Hit Domain in Protein Fon
(pdb code 1x4s). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Solution Structure of Zinc Finger Hit Domain in Protein Fon, PDB code: 1x4s:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 1x4s
Go back to
Zinc Binding Sites List in 1x4s
Zinc binding site 1 out
of 2 in the Solution Structure of Zinc Finger Hit Domain in Protein Fon
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Solution Structure of Zinc Finger Hit Domain in Protein Fon within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn201
b:0.0
occ:1.00
|
SG
|
A:CYS14
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS17
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS37
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS41
|
2.3
|
0.0
|
1.0
|
H
|
A:CYS37
|
3.0
|
0.0
|
1.0
|
HB2
|
A:CYS41
|
3.2
|
0.0
|
1.0
|
HB3
|
A:CYS37
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS41
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS37
|
3.4
|
0.0
|
1.0
|
HB3
|
A:CYS14
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS17
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS14
|
3.5
|
0.0
|
1.0
|
H
|
A:CYS17
|
3.6
|
0.0
|
1.0
|
HB2
|
A:CYS17
|
3.6
|
0.0
|
1.0
|
HB3
|
A:CYS41
|
3.7
|
0.0
|
1.0
|
N
|
A:CYS37
|
3.9
|
0.0
|
1.0
|
HB2
|
A:PHE16
|
3.9
|
0.0
|
1.0
|
HA
|
A:CYS17
|
3.9
|
0.0
|
1.0
|
HB2
|
A:CYS14
|
3.9
|
0.0
|
1.0
|
N
|
A:CYS17
|
3.9
|
0.0
|
1.0
|
CA
|
A:CYS17
|
4.0
|
0.0
|
1.0
|
H
|
A:SER38
|
4.1
|
0.0
|
1.0
|
HB2
|
A:GLN23
|
4.2
|
0.0
|
1.0
|
HB2
|
A:CYS37
|
4.2
|
0.0
|
1.0
|
CA
|
A:CYS37
|
4.3
|
0.0
|
1.0
|
HA
|
A:TYR36
|
4.4
|
0.0
|
1.0
|
HB3
|
A:CYS17
|
4.4
|
0.0
|
1.0
|
H
|
A:CYS41
|
4.6
|
0.0
|
1.0
|
HD2
|
A:PHE16
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS41
|
4.7
|
0.0
|
1.0
|
H
|
A:GLN23
|
4.8
|
0.0
|
1.0
|
C
|
A:PHE16
|
4.8
|
0.0
|
1.0
|
CA
|
A:CYS14
|
4.8
|
0.0
|
1.0
|
O
|
A:CYS14
|
4.8
|
0.0
|
1.0
|
N
|
A:SER38
|
4.9
|
0.0
|
1.0
|
CB
|
A:PHE16
|
4.9
|
0.0
|
1.0
|
C
|
A:TYR36
|
5.0
|
0.0
|
1.0
|
C
|
A:CYS14
|
5.0
|
0.0
|
1.0
|
HB2
|
A:TYR36
|
5.0
|
0.0
|
1.0
|
HA
|
A:CYS41
|
5.0
|
0.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 1x4s
Go back to
Zinc Binding Sites List in 1x4s
Zinc binding site 2 out
of 2 in the Solution Structure of Zinc Finger Hit Domain in Protein Fon
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Solution Structure of Zinc Finger Hit Domain in Protein Fon within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn401
b:0.0
occ:1.00
|
NE2
|
A:HIS45
|
2.0
|
0.0
|
1.0
|
SG
|
A:CYS48
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS32
|
2.4
|
0.0
|
1.0
|
SG
|
A:CYS29
|
2.4
|
0.0
|
1.0
|
HB2
|
A:CYS48
|
3.0
|
0.0
|
1.0
|
CD2
|
A:HIS45
|
3.0
|
0.0
|
1.0
|
CE1
|
A:HIS45
|
3.0
|
0.0
|
1.0
|
CB
|
A:CYS29
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS48
|
3.2
|
0.0
|
1.0
|
HB2
|
A:CYS29
|
3.2
|
0.0
|
1.0
|
HD2
|
A:HIS45
|
3.2
|
0.0
|
1.0
|
HB3
|
A:CYS29
|
3.2
|
0.0
|
1.0
|
HE1
|
A:HIS45
|
3.3
|
0.0
|
1.0
|
HB3
|
A:CYS32
|
3.3
|
0.0
|
1.0
|
HB2
|
A:ALA34
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS32
|
3.5
|
0.0
|
1.0
|
HB3
|
A:CYS48
|
3.7
|
0.0
|
1.0
|
H
|
A:CYS32
|
3.8
|
0.0
|
1.0
|
H
|
A:CYS48
|
3.9
|
0.0
|
1.0
|
HA3
|
A:GLY46
|
4.0
|
0.0
|
1.0
|
ND1
|
A:HIS45
|
4.1
|
0.0
|
1.0
|
CG
|
A:HIS45
|
4.2
|
0.0
|
1.0
|
HB1
|
A:ALA34
|
4.2
|
0.0
|
1.0
|
HB2
|
A:CYS32
|
4.3
|
0.0
|
1.0
|
N
|
A:CYS32
|
4.3
|
0.0
|
1.0
|
HB2
|
A:ARG31
|
4.3
|
0.0
|
1.0
|
CB
|
A:ALA34
|
4.3
|
0.0
|
1.0
|
CA
|
A:CYS32
|
4.5
|
0.0
|
1.0
|
CA
|
A:CYS48
|
4.5
|
0.0
|
1.0
|
N
|
A:CYS48
|
4.5
|
0.0
|
1.0
|
CA
|
A:CYS29
|
4.7
|
0.0
|
1.0
|
HE1
|
A:TYR42
|
4.7
|
0.0
|
1.0
|
H
|
A:ALA34
|
4.7
|
0.0
|
1.0
|
CA
|
A:GLY46
|
4.8
|
0.0
|
1.0
|
H
|
A:ARG31
|
4.8
|
0.0
|
1.0
|
HB3
|
A:ALA34
|
4.9
|
0.0
|
1.0
|
H
|
A:GLY46
|
4.9
|
0.0
|
1.0
|
HB3
|
A:ARG31
|
4.9
|
0.0
|
1.0
|
C
|
A:GLY46
|
4.9
|
0.0
|
1.0
|
O
|
A:GLY46
|
4.9
|
0.0
|
1.0
|
HA
|
A:CYS29
|
4.9
|
0.0
|
1.0
|
N
|
A:GLY46
|
5.0
|
0.0
|
1.0
|
|
Reference:
F.He,
T.Umehara,
K.Tsuda,
M.Inoue,
T.Kigawa,
T.Matsuda,
T.Yabuki,
M.Aoki,
E.Seki,
T.Terada,
M.Shirouzu,
A.Tanaka,
S.Sugano,
Y.Muto,
S.Yokoyama.
Solution Structure of the Zinc Finger Hit Domain in Protein Fon Protein Sci. V. 16 1577 2007.
ISSN: ISSN 0961-8368
PubMed: 17656577
DOI: 10.1110/PS.062635107
Page generated: Wed Oct 16 20:15:49 2024
|