Zinc in PDB 1x3h: Solution Structure of the Lim Domain of Human Leupaxin

The binding sites of Zinc atom in the Solution Structure of the Lim Domain of Human Leupaxin (pdb code 1x3h). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Lim Domain of Human Leupaxin, PDB code: 1x3h:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Solution Structure of the Lim Domain of Human Leupaxin


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Lim Domain of Human Leupaxin within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:0.0 occ:1.00 SG A:CYS21 2.3 0.0 1.0 SG A:CYS18 2.3 0.0 1.0 ND1 A:HIS38 2.3 0.0 1.0 SG A:CYS41 2.3 0.0 1.0 HB2 A:HIS38 2.6 0.0 1.0 H A:CYS21 3.0 0.0 1.0 CG A:HIS38 3.2 0.0 1.0 HB3 A:CYS18 3.2 0.0 1.0 CB A:CYS18 3.2 0.0 1.0 HB2 A:CYS21 3.3 0.0 1.0 HB2 A:CYS41 3.3 0.0 1.0 CB A:HIS38 3.3 0.0 1.0 CE1 A:HIS38 3.4 0.0 1.0 CB A:CYS21 3.4 0.0 1.0 CB A:CYS41 3.4 0.0 1.0 HB2 A:CYS18 3.4 0.0 1.0 N A:CYS21 3.6 0.0 1.0 HE1 A:HIS38 3.7 0.0 1.0 HB3 A:CYS41 3.7 0.0 1.0 HB3 A:HIS38 3.7 0.0 1.0 HA3 A:GLY20 4.1 0.0 1.0 CA A:CYS21 4.1 0.0 1.0 H A:GLY20 4.3 0.0 1.0 HB3 A:CYS21 4.3 0.0 1.0 H A:HIS38 4.3 0.0 1.0 CD2 A:HIS38 4.4 0.0 1.0 NE2 A:HIS38 4.4 0.0 1.0 C A:GLY20 4.4 0.0 1.0 H A:CYS41 4.5 0.0 1.0 CA A:HIS38 4.6 0.0 1.0 CA A:GLY20 4.6 0.0 1.0 N A:HIS38 4.6 0.0 1.0 HG3 A:GLU40 4.6 0.0 1.0 CA A:CYS18 4.7 0.0 1.0 HB2 A:ARG23 4.7 0.0 1.0 N A:GLY20 4.7 0.0 1.0 H A:ASN22 4.7 0.0 1.0 HG2 A:GLU40 4.8 0.0 1.0 CA A:CYS41 4.8 0.0 1.0 HA A:CYS21 4.9 0.0 1.0 H A:ARG23 4.9 0.0 1.0 N A:CYS41 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the Solution Structure of the Lim Domain of Human Leupaxin


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Lim Domain of Human Leupaxin within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:0.0 occ:1.00 SG A:CYS65 2.3 0.0 1.0 SG A:CYS47 2.3 0.0 1.0 SG A:CYS44 2.3 0.0 1.0 ND1 A:HIS68 2.3 0.0 1.0 H A:CYS47 2.7 0.0 1.0 HB2 A:HIS68 2.7 0.0 1.0 HB3 A:CYS47 3.1 0.0 1.0 H A:CYS65 3.2 0.0 1.0 CG A:HIS68 3.2 0.0 1.0 CB A:CYS47 3.3 0.0 1.0 HB2 A:ASP46 3.3 0.0 1.0 HB3 A:CYS65 3.3 0.0 1.0 CE1 A:HIS68 3.4 0.0 1.0 CB A:HIS68 3.4 0.0 1.0 CB A:CYS44 3.4 0.0 1.0 H A:HIS68 3.5 0.0 1.0 CB A:CYS65 3.5 0.0 1.0 HB2 A:CYS44 3.5 0.0 1.0 N A:CYS47 3.5 0.0 1.0 HB3 A:CYS44 3.5 0.0 1.0 HE1 A:HIS68 3.6 0.0 1.0 N A:CYS65 4.0 0.0 1.0 HB3 A:LEU67 4.0 0.0 1.0 H A:ASP46 4.0 0.0 1.0 CA A:CYS47 4.0 0.0 1.0 HB3 A:HIS68 4.1 0.0 1.0 H A:PHE48 4.1 0.0 1.0 HB2 A:CYS47 4.2 0.0 1.0 HG22 A:THR49 4.2 0.0 1.0 CA A:CYS65 4.2 0.0 1.0 N A:HIS68 4.3 0.0 1.0 HG21 A:THR49 4.3 0.0 1.0 HB2 A:CYS65 4.3 0.0 1.0 CB A:ASP46 4.4 0.0 1.0 O A:CYS65 4.4 0.0 1.0 CD2 A:HIS68 4.4 0.0 1.0 NE2 A:HIS68 4.5 0.0 1.0 HD1 A:PHE64 4.5 0.0 1.0 CA A:HIS68 4.5 0.0 1.0 H A:THR49 4.6 0.0 1.0 HD21 A:LEU67 4.6 0.0 1.0 C A:ASP46 4.6 0.0 1.0 H A:TYR69 4.7 0.0 1.0 HD22 A:LEU67 4.7 0.0 1.0 N A:ASP46 4.7 0.0 1.0 H A:GLY45 4.7 0.0 1.0 HB3 A:ASP46 4.7 0.0 1.0 C A:CYS65 4.7 0.0 1.0 N A:PHE48 4.7 0.0 1.0 HA A:PHE64 4.8 0.0 1.0 CG2 A:THR49 4.8 0.0 1.0 C A:CYS47 4.8 0.0 1.0 CA A:ASP46 4.8 0.0 1.0 HA A:CYS47 4.9 0.0 1.0 CA A:CYS44 4.9 0.0 1.0 HB3 A:PHE64 4.9 0.0 1.0

M.Yoneyama, N.Tochio, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama. Solution Structure of the Lim Domain of Human Leupaxin To Be Published.