Atomistry » Zinc » PDB 1ww1-1x6m » 1x3h
Atomistry »
  Zinc »
    PDB 1ww1-1x6m »
      1x3h »

Zinc in PDB 1x3h: Solution Structure of the Lim Domain of Human Leupaxin

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the Lim Domain of Human Leupaxin (pdb code 1x3h). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Lim Domain of Human Leupaxin, PDB code: 1x3h:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 1x3h

Go back to Zinc Binding Sites List in 1x3h
Zinc binding site 1 out of 2 in the Solution Structure of the Lim Domain of Human Leupaxin


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Lim Domain of Human Leupaxin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:0.0
occ:1.00
SG A:CYS21 2.3 0.0 1.0
SG A:CYS18 2.3 0.0 1.0
ND1 A:HIS38 2.3 0.0 1.0
SG A:CYS41 2.3 0.0 1.0
HB2 A:HIS38 2.6 0.0 1.0
H A:CYS21 3.0 0.0 1.0
CG A:HIS38 3.2 0.0 1.0
HB3 A:CYS18 3.2 0.0 1.0
CB A:CYS18 3.2 0.0 1.0
HB2 A:CYS21 3.3 0.0 1.0
HB2 A:CYS41 3.3 0.0 1.0
CB A:HIS38 3.3 0.0 1.0
CE1 A:HIS38 3.4 0.0 1.0
CB A:CYS21 3.4 0.0 1.0
CB A:CYS41 3.4 0.0 1.0
HB2 A:CYS18 3.4 0.0 1.0
N A:CYS21 3.6 0.0 1.0
HE1 A:HIS38 3.7 0.0 1.0
HB3 A:CYS41 3.7 0.0 1.0
HB3 A:HIS38 3.7 0.0 1.0
HA3 A:GLY20 4.1 0.0 1.0
CA A:CYS21 4.1 0.0 1.0
H A:GLY20 4.3 0.0 1.0
HB3 A:CYS21 4.3 0.0 1.0
H A:HIS38 4.3 0.0 1.0
CD2 A:HIS38 4.4 0.0 1.0
NE2 A:HIS38 4.4 0.0 1.0
C A:GLY20 4.4 0.0 1.0
H A:CYS41 4.5 0.0 1.0
CA A:HIS38 4.6 0.0 1.0
CA A:GLY20 4.6 0.0 1.0
N A:HIS38 4.6 0.0 1.0
HG3 A:GLU40 4.6 0.0 1.0
CA A:CYS18 4.7 0.0 1.0
HB2 A:ARG23 4.7 0.0 1.0
N A:GLY20 4.7 0.0 1.0
H A:ASN22 4.7 0.0 1.0
HG2 A:GLU40 4.8 0.0 1.0
CA A:CYS41 4.8 0.0 1.0
HA A:CYS21 4.9 0.0 1.0
H A:ARG23 4.9 0.0 1.0
N A:CYS41 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 1x3h

Go back to Zinc Binding Sites List in 1x3h
Zinc binding site 2 out of 2 in the Solution Structure of the Lim Domain of Human Leupaxin


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Lim Domain of Human Leupaxin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:0.0
occ:1.00
SG A:CYS65 2.3 0.0 1.0
SG A:CYS47 2.3 0.0 1.0
SG A:CYS44 2.3 0.0 1.0
ND1 A:HIS68 2.3 0.0 1.0
H A:CYS47 2.7 0.0 1.0
HB2 A:HIS68 2.7 0.0 1.0
HB3 A:CYS47 3.1 0.0 1.0
H A:CYS65 3.2 0.0 1.0
CG A:HIS68 3.2 0.0 1.0
CB A:CYS47 3.3 0.0 1.0
HB2 A:ASP46 3.3 0.0 1.0
HB3 A:CYS65 3.3 0.0 1.0
CE1 A:HIS68 3.4 0.0 1.0
CB A:HIS68 3.4 0.0 1.0
CB A:CYS44 3.4 0.0 1.0
H A:HIS68 3.5 0.0 1.0
CB A:CYS65 3.5 0.0 1.0
HB2 A:CYS44 3.5 0.0 1.0
N A:CYS47 3.5 0.0 1.0
HB3 A:CYS44 3.5 0.0 1.0
HE1 A:HIS68 3.6 0.0 1.0
N A:CYS65 4.0 0.0 1.0
HB3 A:LEU67 4.0 0.0 1.0
H A:ASP46 4.0 0.0 1.0
CA A:CYS47 4.0 0.0 1.0
HB3 A:HIS68 4.1 0.0 1.0
H A:PHE48 4.1 0.0 1.0
HB2 A:CYS47 4.2 0.0 1.0
HG22 A:THR49 4.2 0.0 1.0
CA A:CYS65 4.2 0.0 1.0
N A:HIS68 4.3 0.0 1.0
HG21 A:THR49 4.3 0.0 1.0
HB2 A:CYS65 4.3 0.0 1.0
CB A:ASP46 4.4 0.0 1.0
O A:CYS65 4.4 0.0 1.0
CD2 A:HIS68 4.4 0.0 1.0
NE2 A:HIS68 4.5 0.0 1.0
HD1 A:PHE64 4.5 0.0 1.0
CA A:HIS68 4.5 0.0 1.0
H A:THR49 4.6 0.0 1.0
HD21 A:LEU67 4.6 0.0 1.0
C A:ASP46 4.6 0.0 1.0
H A:TYR69 4.7 0.0 1.0
HD22 A:LEU67 4.7 0.0 1.0
N A:ASP46 4.7 0.0 1.0
H A:GLY45 4.7 0.0 1.0
HB3 A:ASP46 4.7 0.0 1.0
C A:CYS65 4.7 0.0 1.0
N A:PHE48 4.7 0.0 1.0
HA A:PHE64 4.8 0.0 1.0
CG2 A:THR49 4.8 0.0 1.0
C A:CYS47 4.8 0.0 1.0
CA A:ASP46 4.8 0.0 1.0
HA A:CYS47 4.9 0.0 1.0
CA A:CYS44 4.9 0.0 1.0
HB3 A:PHE64 4.9 0.0 1.0

Reference:

M.Yoneyama, N.Tochio, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama. Solution Structure of the Lim Domain of Human Leupaxin To Be Published.
Page generated: Wed Dec 16 03:10:57 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy